Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRAV16A0A0A6YYK6 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAV16A0A0A6YYK6 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV16A0A0A6YYK6 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV16A0A0A6YYK6 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAV16A0A0A6YYK6 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV16A0A0A6YYK6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV16A0A0A6YYK6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV16A0A0A6YYK6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV16A0A0A6YYK6 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
TRAV16A0A0A6YYK6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV16A0A0A6YYK6 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC18.34■□□□□ 0.53
TRAV16A0A0A6YYK6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
TRAV16A0A0A6YYK6 EBPL-203ENST00000378270 579 ntTSL 2 BASIC18.33■□□□□ 0.52
TRAV16A0A0A6YYK6 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV16A0A0A6YYK6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.32■□□□□ 0.52
TRAV16A0A0A6YYK6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TRAV16A0A0A6YYK6 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TRAV16A0A0A6YYK6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV16A0A0A6YYK6 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV16A0A0A6YYK6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
TRAV16A0A0A6YYK6 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV16A0A0A6YYK6 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV16A0A0A6YYK6 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC18.3■□□□□ 0.52
TRAV16A0A0A6YYK6 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV16A0A0A6YYK6 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV16A0A0A6YYK6 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV16A0A0A6YYK6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV16A0A0A6YYK6 AL031258.1-201ENST00000623562 325 ntBASIC18.28■□□□□ 0.52
TRAV16A0A0A6YYK6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV16A0A0A6YYK6 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV16A0A0A6YYK6 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
TRAV16A0A0A6YYK6 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV16A0A0A6YYK6 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC18.26■□□□□ 0.51
TRAV16A0A0A6YYK6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV16A0A0A6YYK6 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TRAV16A0A0A6YYK6 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV16A0A0A6YYK6 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRAV16A0A0A6YYK6 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV16A0A0A6YYK6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV16A0A0A6YYK6 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV16A0A0A6YYK6 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV16A0A0A6YYK6 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV16A0A0A6YYK6 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV16A0A0A6YYK6 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV16A0A0A6YYK6 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRAV16A0A0A6YYK6 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV16A0A0A6YYK6 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC18.24■□□□□ 0.51
TRAV16A0A0A6YYK6 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV16A0A0A6YYK6 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV16A0A0A6YYK6 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV16A0A0A6YYK6 AC142086.6-201ENST00000621154 1765 ntBASIC18.22■□□□□ 0.51
TRAV16A0A0A6YYK6 CREM-210ENST00000374721 2020 ntTSL 5 BASIC18.22■□□□□ 0.51
TRAV16A0A0A6YYK6 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV16A0A0A6YYK6 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV16A0A0A6YYK6 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV16A0A0A6YYK6 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV16A0A0A6YYK6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRAV16A0A0A6YYK6 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.21■□□□□ 0.51
TRAV16A0A0A6YYK6 AC120057.4-201ENST00000624722 1615 ntBASIC18.21■□□□□ 0.51
TRAV16A0A0A6YYK6 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV16A0A0A6YYK6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV16A0A0A6YYK6 AC135731.1-201ENST00000569415 2548 ntBASIC18.19■□□□□ 0.5
TRAV16A0A0A6YYK6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV16A0A0A6YYK6 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV16A0A0A6YYK6 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV16A0A0A6YYK6 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV16A0A0A6YYK6 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRAV16A0A0A6YYK6 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TRAV16A0A0A6YYK6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV16A0A0A6YYK6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV16A0A0A6YYK6 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC18.17■□□□□ 0.5
TRAV16A0A0A6YYK6 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV16A0A0A6YYK6 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV16A0A0A6YYK6 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
TRAV16A0A0A6YYK6 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV16A0A0A6YYK6 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV16A0A0A6YYK6 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV16A0A0A6YYK6 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC18.14■□□□□ 0.49
TRAV16A0A0A6YYK6 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC18.14■□□□□ 0.49
TRAV16A0A0A6YYK6 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV16A0A0A6YYK6 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV16A0A0A6YYK6 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV16A0A0A6YYK6 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC18.13■□□□□ 0.49
TRAV16A0A0A6YYK6 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV16A0A0A6YYK6 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TRAV16A0A0A6YYK6 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV16A0A0A6YYK6 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC18.11■□□□□ 0.49
TRAV16A0A0A6YYK6 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV16A0A0A6YYK6 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV16A0A0A6YYK6 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC18.11■□□□□ 0.49
TRAV16A0A0A6YYK6 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV16A0A0A6YYK6 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV16A0A0A6YYK6 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV16A0A0A6YYK6 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV16A0A0A6YYK6 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAV16A0A0A6YYK6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV16A0A0A6YYK6 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAV16A0A0A6YYK6 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TRAV16A0A0A6YYK6 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms