Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.71■■□□□ 1.71
CCDC187A0A096LP49 MIR639-201ENST00000384974 98 ntBASIC25.7■■□□□ 1.7
CCDC187A0A096LP49 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
CCDC187A0A096LP49 MIR6090-201ENST00000622481 60 ntBASIC25.69■■□□□ 1.7
CCDC187A0A096LP49 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CCDC187A0A096LP49 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC25.67■■□□□ 1.7
CCDC187A0A096LP49 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CCDC187A0A096LP49 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.66■■□□□ 1.7
CCDC187A0A096LP49 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.66■■□□□ 1.7
CCDC187A0A096LP49 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CCDC187A0A096LP49 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.65■■□□□ 1.7
CCDC187A0A096LP49 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.63■■□□□ 1.69
CCDC187A0A096LP49 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CCDC187A0A096LP49 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CCDC187A0A096LP49 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CCDC187A0A096LP49 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.62■■□□□ 1.69
CCDC187A0A096LP49 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CCDC187A0A096LP49 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CCDC187A0A096LP49 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
CCDC187A0A096LP49 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CCDC187A0A096LP49 MIR3648-2-201ENST00000581792 180 ntBASIC25.61■■□□□ 1.69
CCDC187A0A096LP49 MIR3648-1-201ENST00000615959 180 ntBASIC25.61■■□□□ 1.69
CCDC187A0A096LP49 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
CCDC187A0A096LP49 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.6■■□□□ 1.69
CCDC187A0A096LP49 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.6■■□□□ 1.69
CCDC187A0A096LP49 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.59■■□□□ 1.69
CCDC187A0A096LP49 AC016575.1-201ENST00000607026 382 ntBASIC25.59■■□□□ 1.69
CCDC187A0A096LP49 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.58■■□□□ 1.69
CCDC187A0A096LP49 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.58■■□□□ 1.69
CCDC187A0A096LP49 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.58■■□□□ 1.69
CCDC187A0A096LP49 LINC01971-201ENST00000617888 1048 ntBASIC25.58■■□□□ 1.69
CCDC187A0A096LP49 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CCDC187A0A096LP49 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CCDC187A0A096LP49 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CCDC187A0A096LP49 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
CCDC187A0A096LP49 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.56■■□□□ 1.68
CCDC187A0A096LP49 DUX4L11-201ENST00000611504 1267 ntBASIC25.56■■□□□ 1.68
CCDC187A0A096LP49 DUX4L12-201ENST00000614593 1267 ntBASIC25.56■■□□□ 1.68
CCDC187A0A096LP49 DUX4L14-201ENST00000621227 1267 ntBASIC25.56■■□□□ 1.68
CCDC187A0A096LP49 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC25.54■■□□□ 1.68
CCDC187A0A096LP49 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CCDC187A0A096LP49 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
CCDC187A0A096LP49 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CCDC187A0A096LP49 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CCDC187A0A096LP49 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CCDC187A0A096LP49 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.51■■□□□ 1.67
CCDC187A0A096LP49 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CCDC187A0A096LP49 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
CCDC187A0A096LP49 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CCDC187A0A096LP49 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CCDC187A0A096LP49 CR559946.2-201ENST00000623684 991 ntBASIC25.5■■□□□ 1.67
CCDC187A0A096LP49 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CCDC187A0A096LP49 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.49■■□□□ 1.67
CCDC187A0A096LP49 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CCDC187A0A096LP49 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CCDC187A0A096LP49 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.47■■□□□ 1.67
CCDC187A0A096LP49 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.46■■□□□ 1.67
CCDC187A0A096LP49 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC25.46■■□□□ 1.67
CCDC187A0A096LP49 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCDC187A0A096LP49 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CCDC187A0A096LP49 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CCDC187A0A096LP49 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.45■■□□□ 1.66
CCDC187A0A096LP49 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
CCDC187A0A096LP49 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC187A0A096LP49 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CCDC187A0A096LP49 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.44■■□□□ 1.66
CCDC187A0A096LP49 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.44■■□□□ 1.66
CCDC187A0A096LP49 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CCDC187A0A096LP49 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CCDC187A0A096LP49 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
CCDC187A0A096LP49 HSD17B1P1-201ENST00000590052 955 ntBASIC25.42■■□□□ 1.66
CCDC187A0A096LP49 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.41■■□□□ 1.66
CCDC187A0A096LP49 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
CCDC187A0A096LP49 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC187A0A096LP49 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CCDC187A0A096LP49 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC25.38■■□□□ 1.65
CCDC187A0A096LP49 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
CCDC187A0A096LP49 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCDC187A0A096LP49 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
CCDC187A0A096LP49 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC25.37■■□□□ 1.65
CCDC187A0A096LP49 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CCDC187A0A096LP49 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.36■■□□□ 1.65
CCDC187A0A096LP49 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
CCDC187A0A096LP49 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CCDC187A0A096LP49 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
CCDC187A0A096LP49 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.34■■□□□ 1.65
CCDC187A0A096LP49 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC187A0A096LP49 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC187A0A096LP49 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CCDC187A0A096LP49 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.33■■□□□ 1.65
CCDC187A0A096LP49 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.32■■□□□ 1.64
CCDC187A0A096LP49 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC187A0A096LP49 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CCDC187A0A096LP49 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CCDC187A0A096LP49 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CCDC187A0A096LP49 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.3■■□□□ 1.64
CCDC187A0A096LP49 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.3■■□□□ 1.64
CCDC187A0A096LP49 DUX4L13-201ENST00000554103 1267 ntBASIC25.3■■□□□ 1.64
CCDC187A0A096LP49 DUX4L15-201ENST00000611059 1267 ntBASIC25.3■■□□□ 1.64
CCDC187A0A096LP49 DUX4L23-201ENST00000615195 1269 ntBASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms