Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHTOPQ9Y3Y2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHTOPQ9Y3Y2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHTOPQ9Y3Y2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHTOPQ9Y3Y2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CHTOPQ9Y3Y2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC15.02■□□□□ -0
CHTOPQ9Y3Y2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC15.02■□□□□ -0
CHTOPQ9Y3Y2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC15.02■□□□□ -0
CHTOPQ9Y3Y2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHTOPQ9Y3Y2 C8orf49-201ENST00000525043 1968 ntBASIC15.02■□□□□ -0
CHTOPQ9Y3Y2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHTOPQ9Y3Y2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC15.02■□□□□ -0
CHTOPQ9Y3Y2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC15.02■□□□□ -0
CHTOPQ9Y3Y2 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
CHTOPQ9Y3Y2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CHTOPQ9Y3Y2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.02■□□□□ -0
CHTOPQ9Y3Y2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC15.02■□□□□ -0
CHTOPQ9Y3Y2 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CHTOPQ9Y3Y2 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC15.02■□□□□ -0
CHTOPQ9Y3Y2 GAK-223ENST00000628912 497 ntTSL 5 BASIC15.02■□□□□ -0
CHTOPQ9Y3Y2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CHTOPQ9Y3Y2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHTOPQ9Y3Y2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHTOPQ9Y3Y2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CHTOPQ9Y3Y2 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHTOPQ9Y3Y2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC15.02□□□□□ -0.01
CHTOPQ9Y3Y2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC15.02□□□□□ -0.01
CHTOPQ9Y3Y2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHTOPQ9Y3Y2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHTOPQ9Y3Y2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHTOPQ9Y3Y2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC15.01□□□□□ -0.01
CHTOPQ9Y3Y2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHTOPQ9Y3Y2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHTOPQ9Y3Y2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHTOPQ9Y3Y2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CHTOPQ9Y3Y2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHTOPQ9Y3Y2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC15.01□□□□□ -0.01
CHTOPQ9Y3Y2 AC104564.3-201ENST00000582367 638 ntBASIC15.01□□□□□ -0.01
CHTOPQ9Y3Y2 CA15P2-201ENST00000611168 834 ntBASIC15.01□□□□□ -0.01
CHTOPQ9Y3Y2 AC133552.2-201ENST00000619106 1032 ntBASIC15.01□□□□□ -0.01
CHTOPQ9Y3Y2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC15.01□□□□□ -0.01
CHTOPQ9Y3Y2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHTOPQ9Y3Y2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
CHTOPQ9Y3Y2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHTOPQ9Y3Y2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHTOPQ9Y3Y2 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CHTOPQ9Y3Y2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC15.01□□□□□ -0.01
CHTOPQ9Y3Y2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC15□□□□□ -0.01
CHTOPQ9Y3Y2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CHTOPQ9Y3Y2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC15□□□□□ -0.01
CHTOPQ9Y3Y2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHTOPQ9Y3Y2 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15□□□□□ -0.01
CHTOPQ9Y3Y2 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
CHTOPQ9Y3Y2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHTOPQ9Y3Y2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHTOPQ9Y3Y2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CHTOPQ9Y3Y2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC15□□□□□ -0.01
CHTOPQ9Y3Y2 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHTOPQ9Y3Y2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15□□□□□ -0.01
CHTOPQ9Y3Y2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC15□□□□□ -0.01
CHTOPQ9Y3Y2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHTOPQ9Y3Y2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CHTOPQ9Y3Y2 AC009086.3-201ENST00000623486 1008 ntBASIC15□□□□□ -0.01
CHTOPQ9Y3Y2 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CHTOPQ9Y3Y2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHTOPQ9Y3Y2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHTOPQ9Y3Y2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHTOPQ9Y3Y2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15□□□□□ -0.01
CHTOPQ9Y3Y2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CHTOPQ9Y3Y2 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHTOPQ9Y3Y2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHTOPQ9Y3Y2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC15□□□□□ -0.01
CHTOPQ9Y3Y2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHTOPQ9Y3Y2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
CHTOPQ9Y3Y2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CHTOPQ9Y3Y2 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CHTOPQ9Y3Y2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHTOPQ9Y3Y2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHTOPQ9Y3Y2 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHTOPQ9Y3Y2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHTOPQ9Y3Y2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHTOPQ9Y3Y2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHTOPQ9Y3Y2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHTOPQ9Y3Y2 AC009831.1-201ENST00000580420 1582 ntBASIC14.99□□□□□ -0.01
CHTOPQ9Y3Y2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC14.99□□□□□ -0.01
CHTOPQ9Y3Y2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHTOPQ9Y3Y2 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CHTOPQ9Y3Y2 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
CHTOPQ9Y3Y2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHTOPQ9Y3Y2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC14.99□□□□□ -0.01
CHTOPQ9Y3Y2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC14.99□□□□□ -0.01
CHTOPQ9Y3Y2 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHTOPQ9Y3Y2 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CHTOPQ9Y3Y2 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CHTOPQ9Y3Y2 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHTOPQ9Y3Y2 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CHTOPQ9Y3Y2 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHTOPQ9Y3Y2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC14.99□□□□□ -0.01
CHTOPQ9Y3Y2 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CHTOPQ9Y3Y2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms