Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN2Q9UHD9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC17.67■□□□□ 0.42
UBQLN2Q9UHD9 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN2Q9UHD9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN2Q9UHD9 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
UBQLN2Q9UHD9 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN2Q9UHD9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
UBQLN2Q9UHD9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN2Q9UHD9 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.67■□□□□ 0.42
UBQLN2Q9UHD9 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN2Q9UHD9 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN2Q9UHD9 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.67■□□□□ 0.42
UBQLN2Q9UHD9 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN2Q9UHD9 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.67■□□□□ 0.42
UBQLN2Q9UHD9 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
UBQLN2Q9UHD9 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN2Q9UHD9 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.67■□□□□ 0.42
UBQLN2Q9UHD9 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN2Q9UHD9 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.67■□□□□ 0.42
UBQLN2Q9UHD9 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN2Q9UHD9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN2Q9UHD9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN2Q9UHD9 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN2Q9UHD9 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN2Q9UHD9 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN2Q9UHD9 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
UBQLN2Q9UHD9 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBQLN2Q9UHD9 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.67■□□□□ 0.42
UBQLN2Q9UHD9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN2Q9UHD9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN2Q9UHD9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.66■□□□□ 0.42
UBQLN2Q9UHD9 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN2Q9UHD9 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN2Q9UHD9 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
UBQLN2Q9UHD9 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN2Q9UHD9 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN2Q9UHD9 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN2Q9UHD9 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN2Q9UHD9 AC103834.1-201ENST00000520383 144 ntBASIC17.66■□□□□ 0.42
UBQLN2Q9UHD9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC17.66■□□□□ 0.42
UBQLN2Q9UHD9 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN2Q9UHD9 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN2Q9UHD9 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN2Q9UHD9 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN2Q9UHD9 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN2Q9UHD9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN2Q9UHD9 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
UBQLN2Q9UHD9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
UBQLN2Q9UHD9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN2Q9UHD9 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.66■□□□□ 0.42
UBQLN2Q9UHD9 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
UBQLN2Q9UHD9 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN2Q9UHD9 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN2Q9UHD9 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN2Q9UHD9 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBQLN2Q9UHD9 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
UBQLN2Q9UHD9 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN2Q9UHD9 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN2Q9UHD9 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN2Q9UHD9 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN2Q9UHD9 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN2Q9UHD9 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN2Q9UHD9 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN2Q9UHD9 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
UBQLN2Q9UHD9 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC17.65■□□□□ 0.42
UBQLN2Q9UHD9 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.65■□□□□ 0.42
UBQLN2Q9UHD9 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN2Q9UHD9 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN2Q9UHD9 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN2Q9UHD9 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
UBQLN2Q9UHD9 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN2Q9UHD9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.65■□□□□ 0.42
UBQLN2Q9UHD9 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN2Q9UHD9 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
UBQLN2Q9UHD9 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN2Q9UHD9 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.65■□□□□ 0.42
UBQLN2Q9UHD9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBQLN2Q9UHD9 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
UBQLN2Q9UHD9 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.64■□□□□ 0.42
UBQLN2Q9UHD9 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
UBQLN2Q9UHD9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
UBQLN2Q9UHD9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
UBQLN2Q9UHD9 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.64■□□□□ 0.42
UBQLN2Q9UHD9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN2Q9UHD9 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN2Q9UHD9 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN2Q9UHD9 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN2Q9UHD9 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.64■□□□□ 0.41
UBQLN2Q9UHD9 AC019171.1-201ENST00000601251 1056 ntBASIC17.64■□□□□ 0.41
UBQLN2Q9UHD9 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN2Q9UHD9 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
UBQLN2Q9UHD9 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN2Q9UHD9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.64■□□□□ 0.41
UBQLN2Q9UHD9 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN2Q9UHD9 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.63■□□□□ 0.41
UBQLN2Q9UHD9 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.63■□□□□ 0.41
UBQLN2Q9UHD9 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN2Q9UHD9 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
UBQLN2Q9UHD9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN2Q9UHD9 AL022069.1-201ENST00000568025 1636 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms