Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
THUMPD1Q9NXG2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
THUMPD1Q9NXG2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
THUMPD1Q9NXG2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
THUMPD1Q9NXG2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
THUMPD1Q9NXG2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
THUMPD1Q9NXG2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
THUMPD1Q9NXG2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
THUMPD1Q9NXG2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.73■□□□□ 0.75
THUMPD1Q9NXG2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
THUMPD1Q9NXG2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
THUMPD1Q9NXG2 AL049796.1-201ENST00000565336 1766 ntBASIC19.72■□□□□ 0.75
THUMPD1Q9NXG2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.72■□□□□ 0.75
THUMPD1Q9NXG2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
THUMPD1Q9NXG2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
THUMPD1Q9NXG2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
THUMPD1Q9NXG2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
THUMPD1Q9NXG2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
THUMPD1Q9NXG2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
THUMPD1Q9NXG2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
THUMPD1Q9NXG2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
THUMPD1Q9NXG2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
THUMPD1Q9NXG2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.72■□□□□ 0.75
THUMPD1Q9NXG2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
THUMPD1Q9NXG2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
THUMPD1Q9NXG2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
THUMPD1Q9NXG2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
THUMPD1Q9NXG2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
THUMPD1Q9NXG2 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
THUMPD1Q9NXG2 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
THUMPD1Q9NXG2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
THUMPD1Q9NXG2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.72■□□□□ 0.75
THUMPD1Q9NXG2 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
THUMPD1Q9NXG2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
THUMPD1Q9NXG2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
THUMPD1Q9NXG2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
THUMPD1Q9NXG2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
THUMPD1Q9NXG2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
THUMPD1Q9NXG2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.71■□□□□ 0.75
THUMPD1Q9NXG2 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.71■□□□□ 0.75
THUMPD1Q9NXG2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
THUMPD1Q9NXG2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
THUMPD1Q9NXG2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.71■□□□□ 0.75
THUMPD1Q9NXG2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.71■□□□□ 0.75
THUMPD1Q9NXG2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
THUMPD1Q9NXG2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.71■□□□□ 0.75
THUMPD1Q9NXG2 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.71■□□□□ 0.75
THUMPD1Q9NXG2 AC027682.1-201ENST00000562846 899 ntBASIC19.71■□□□□ 0.75
THUMPD1Q9NXG2 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
THUMPD1Q9NXG2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.71■□□□□ 0.75
THUMPD1Q9NXG2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.71■□□□□ 0.75
THUMPD1Q9NXG2 AC131212.1-201ENST00000613771 668 ntBASIC19.71■□□□□ 0.75
THUMPD1Q9NXG2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
THUMPD1Q9NXG2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
THUMPD1Q9NXG2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
THUMPD1Q9NXG2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
THUMPD1Q9NXG2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
THUMPD1Q9NXG2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
THUMPD1Q9NXG2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
THUMPD1Q9NXG2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
THUMPD1Q9NXG2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
THUMPD1Q9NXG2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
THUMPD1Q9NXG2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.7■□□□□ 0.74
THUMPD1Q9NXG2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
THUMPD1Q9NXG2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.7■□□□□ 0.74
THUMPD1Q9NXG2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
THUMPD1Q9NXG2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
THUMPD1Q9NXG2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
THUMPD1Q9NXG2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
THUMPD1Q9NXG2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
THUMPD1Q9NXG2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
THUMPD1Q9NXG2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
THUMPD1Q9NXG2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.7■□□□□ 0.74
THUMPD1Q9NXG2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
THUMPD1Q9NXG2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
THUMPD1Q9NXG2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.7■□□□□ 0.74
THUMPD1Q9NXG2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
THUMPD1Q9NXG2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.7■□□□□ 0.74
THUMPD1Q9NXG2 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
THUMPD1Q9NXG2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.7■□□□□ 0.74
THUMPD1Q9NXG2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.7■□□□□ 0.74
THUMPD1Q9NXG2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.7■□□□□ 0.74
THUMPD1Q9NXG2 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
THUMPD1Q9NXG2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.7■□□□□ 0.74
THUMPD1Q9NXG2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
THUMPD1Q9NXG2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
THUMPD1Q9NXG2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
THUMPD1Q9NXG2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.69■□□□□ 0.74
THUMPD1Q9NXG2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
THUMPD1Q9NXG2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
THUMPD1Q9NXG2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.69■□□□□ 0.74
THUMPD1Q9NXG2 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.69■□□□□ 0.74
THUMPD1Q9NXG2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
THUMPD1Q9NXG2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
THUMPD1Q9NXG2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
THUMPD1Q9NXG2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.69■□□□□ 0.74
THUMPD1Q9NXG2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
THUMPD1Q9NXG2 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
THUMPD1Q9NXG2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.69■□□□□ 0.74
THUMPD1Q9NXG2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms