Protein–RNA interactions for Protein: Q9NWB1

RBFOX1, RNA binding protein fox-1 homolog 1, humanhuman

Known RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1Q9NWB1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RBFOX1Q9NWB1 MIR3181-201ENST00000578512 73 ntBASIC18.47■□□□□ 0.55
RBFOX1Q9NWB1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.47■□□□□ 0.55
RBFOX1Q9NWB1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.47■□□□□ 0.55
RBFOX1Q9NWB1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.47■□□□□ 0.55
RBFOX1Q9NWB1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RBFOX1Q9NWB1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RBFOX1Q9NWB1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.47■□□□□ 0.55
RBFOX1Q9NWB1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RBFOX1Q9NWB1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
RBFOX1Q9NWB1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RBFOX1Q9NWB1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RBFOX1Q9NWB1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RBFOX1Q9NWB1 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RBFOX1Q9NWB1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RBFOX1Q9NWB1 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RBFOX1Q9NWB1 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RBFOX1Q9NWB1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RBFOX1Q9NWB1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.46■□□□□ 0.55
RBFOX1Q9NWB1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RBFOX1Q9NWB1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.46■□□□□ 0.55
RBFOX1Q9NWB1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.46■□□□□ 0.55
RBFOX1Q9NWB1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RBFOX1Q9NWB1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RBFOX1Q9NWB1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RBFOX1Q9NWB1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.46■□□□□ 0.55
RBFOX1Q9NWB1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.46■□□□□ 0.55
RBFOX1Q9NWB1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.46■□□□□ 0.55
RBFOX1Q9NWB1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.46■□□□□ 0.55
RBFOX1Q9NWB1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RBFOX1Q9NWB1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.46■□□□□ 0.55
RBFOX1Q9NWB1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RBFOX1Q9NWB1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RBFOX1Q9NWB1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RBFOX1Q9NWB1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
RBFOX1Q9NWB1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
RBFOX1Q9NWB1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
RBFOX1Q9NWB1 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RBFOX1Q9NWB1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RBFOX1Q9NWB1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RBFOX1Q9NWB1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RBFOX1Q9NWB1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RBFOX1Q9NWB1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RBFOX1Q9NWB1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
RBFOX1Q9NWB1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
RBFOX1Q9NWB1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RBFOX1Q9NWB1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RBFOX1Q9NWB1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RBFOX1Q9NWB1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.45■□□□□ 0.54
RBFOX1Q9NWB1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.45■□□□□ 0.54
RBFOX1Q9NWB1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RBFOX1Q9NWB1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.45■□□□□ 0.54
RBFOX1Q9NWB1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RBFOX1Q9NWB1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RBFOX1Q9NWB1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RBFOX1Q9NWB1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RBFOX1Q9NWB1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RBFOX1Q9NWB1 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
RBFOX1Q9NWB1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RBFOX1Q9NWB1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RBFOX1Q9NWB1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RBFOX1Q9NWB1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
RBFOX1Q9NWB1 OXCT2P1-201ENST00000447263 1535 ntBASIC18.44■□□□□ 0.54
RBFOX1Q9NWB1 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RBFOX1Q9NWB1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
RBFOX1Q9NWB1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RBFOX1Q9NWB1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
RBFOX1Q9NWB1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RBFOX1Q9NWB1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RBFOX1Q9NWB1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.44■□□□□ 0.54
RBFOX1Q9NWB1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.44■□□□□ 0.54
RBFOX1Q9NWB1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
RBFOX1Q9NWB1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RBFOX1Q9NWB1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RBFOX1Q9NWB1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RBFOX1Q9NWB1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RBFOX1Q9NWB1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RBFOX1Q9NWB1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RBFOX1Q9NWB1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RBFOX1Q9NWB1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
RBFOX1Q9NWB1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
RBFOX1Q9NWB1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
RBFOX1Q9NWB1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.43■□□□□ 0.54
RBFOX1Q9NWB1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
RBFOX1Q9NWB1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RBFOX1Q9NWB1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RBFOX1Q9NWB1 MIR4466-201ENST00000606121 54 ntBASIC18.43■□□□□ 0.54
RBFOX1Q9NWB1 AC092171.4-201ENST00000609130 632 ntBASIC18.43■□□□□ 0.54
RBFOX1Q9NWB1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.43■□□□□ 0.54
RBFOX1Q9NWB1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RBFOX1Q9NWB1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RBFOX1Q9NWB1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RBFOX1Q9NWB1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RBFOX1Q9NWB1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RBFOX1Q9NWB1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RBFOX1Q9NWB1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RBFOX1Q9NWB1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.43■□□□□ 0.54
RBFOX1Q9NWB1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RBFOX1Q9NWB1 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RBFOX1Q9NWB1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms