Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
UPF2Q9HAU5 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
UPF2Q9HAU5 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
UPF2Q9HAU5 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
UPF2Q9HAU5 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
UPF2Q9HAU5 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC25.72■■□□□ 1.71
UPF2Q9HAU5 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC25.72■■□□□ 1.71
UPF2Q9HAU5 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
UPF2Q9HAU5 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC25.72■■□□□ 1.71
UPF2Q9HAU5 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
UPF2Q9HAU5 MIR3181-201ENST00000578512 73 ntBASIC25.72■■□□□ 1.71
UPF2Q9HAU5 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
UPF2Q9HAU5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
UPF2Q9HAU5 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
UPF2Q9HAU5 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.71■■□□□ 1.71
UPF2Q9HAU5 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC25.71■■□□□ 1.71
UPF2Q9HAU5 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
UPF2Q9HAU5 ME2-216ENST00000639850 2331 ntTSL 5 BASIC25.71■■□□□ 1.71
UPF2Q9HAU5 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
UPF2Q9HAU5 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
UPF2Q9HAU5 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
UPF2Q9HAU5 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC25.71■■□□□ 1.71
UPF2Q9HAU5 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC25.71■■□□□ 1.71
UPF2Q9HAU5 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
UPF2Q9HAU5 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC25.71■■□□□ 1.71
UPF2Q9HAU5 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
UPF2Q9HAU5 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
UPF2Q9HAU5 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC25.71■■□□□ 1.71
UPF2Q9HAU5 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC25.71■■□□□ 1.71
UPF2Q9HAU5 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC25.71■■□□□ 1.71
UPF2Q9HAU5 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC25.71■■□□□ 1.71
UPF2Q9HAU5 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
UPF2Q9HAU5 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
UPF2Q9HAU5 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC25.7■■□□□ 1.71
UPF2Q9HAU5 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC25.7■■□□□ 1.71
UPF2Q9HAU5 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
UPF2Q9HAU5 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.7■■□□□ 1.7
UPF2Q9HAU5 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
UPF2Q9HAU5 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
UPF2Q9HAU5 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
UPF2Q9HAU5 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
UPF2Q9HAU5 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
UPF2Q9HAU5 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC25.69■■□□□ 1.7
UPF2Q9HAU5 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
UPF2Q9HAU5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC25.69■■□□□ 1.7
UPF2Q9HAU5 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC25.69■■□□□ 1.7
UPF2Q9HAU5 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
UPF2Q9HAU5 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
UPF2Q9HAU5 AC006128.1-201ENST00000624704 1661 ntBASIC25.69■■□□□ 1.7
UPF2Q9HAU5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.69■■□□□ 1.7
UPF2Q9HAU5 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC25.69■■□□□ 1.7
UPF2Q9HAU5 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
UPF2Q9HAU5 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC25.69■■□□□ 1.7
UPF2Q9HAU5 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC25.69■■□□□ 1.7
UPF2Q9HAU5 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
UPF2Q9HAU5 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
UPF2Q9HAU5 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
UPF2Q9HAU5 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC25.68■■□□□ 1.7
UPF2Q9HAU5 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
UPF2Q9HAU5 GABARAPL3-202ENST00000624044 1851 ntBASIC25.68■■□□□ 1.7
UPF2Q9HAU5 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC25.68■■□□□ 1.7
UPF2Q9HAU5 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC25.68■■□□□ 1.7
UPF2Q9HAU5 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC25.68■■□□□ 1.7
UPF2Q9HAU5 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
UPF2Q9HAU5 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
UPF2Q9HAU5 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC25.68■■□□□ 1.7
UPF2Q9HAU5 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
UPF2Q9HAU5 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
UPF2Q9HAU5 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
UPF2Q9HAU5 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC25.68■■□□□ 1.7
UPF2Q9HAU5 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
UPF2Q9HAU5 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC25.67■■□□□ 1.7
UPF2Q9HAU5 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
UPF2Q9HAU5 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
UPF2Q9HAU5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC25.67■■□□□ 1.7
UPF2Q9HAU5 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
UPF2Q9HAU5 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.67■■□□□ 1.7
UPF2Q9HAU5 UNC93B8-201ENST00000511903 705 ntBASIC25.67■■□□□ 1.7
UPF2Q9HAU5 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC25.67■■□□□ 1.7
UPF2Q9HAU5 AC092171.4-201ENST00000609130 632 ntBASIC25.67■■□□□ 1.7
UPF2Q9HAU5 PALM-207ENST00000590161 2137 ntTSL 4 BASIC25.67■■□□□ 1.7
UPF2Q9HAU5 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
UPF2Q9HAU5 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC25.67■■□□□ 1.7
UPF2Q9HAU5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.67■■□□□ 1.7
UPF2Q9HAU5 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
UPF2Q9HAU5 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
UPF2Q9HAU5 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC25.67■■□□□ 1.7
UPF2Q9HAU5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
UPF2Q9HAU5 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
UPF2Q9HAU5 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
UPF2Q9HAU5 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
UPF2Q9HAU5 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
UPF2Q9HAU5 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
UPF2Q9HAU5 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.66■■□□□ 1.7
UPF2Q9HAU5 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
UPF2Q9HAU5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.66■■□□□ 1.7
UPF2Q9HAU5 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.66■■□□□ 1.7
UPF2Q9HAU5 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.66■■□□□ 1.7
UPF2Q9HAU5 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC25.66■■□□□ 1.7
UPF2Q9HAU5 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC25.65■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms