Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC10.66□□□□□ -0.7
KRTAP3-1Q9BYR8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC10.66□□□□□ -0.7
KRTAP3-1Q9BYR8 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP3-1Q9BYR8 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP3-1Q9BYR8 AP006587.3-201ENST00000525742 1516 ntBASIC10.66□□□□□ -0.7
KRTAP3-1Q9BYR8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP3-1Q9BYR8 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC10.66□□□□□ -0.7
KRTAP3-1Q9BYR8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
KRTAP3-1Q9BYR8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP3-1Q9BYR8 RNF165-205ENST00000588679 2904 ntBASIC10.66□□□□□ -0.7
KRTAP3-1Q9BYR8 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP3-1Q9BYR8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP3-1Q9BYR8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
KRTAP3-1Q9BYR8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP3-1Q9BYR8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP3-1Q9BYR8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP3-1Q9BYR8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
KRTAP3-1Q9BYR8 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
KRTAP3-1Q9BYR8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
KRTAP3-1Q9BYR8 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
KRTAP3-1Q9BYR8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-1Q9BYR8 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-1Q9BYR8 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-1Q9BYR8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-1Q9BYR8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-1Q9BYR8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-1Q9BYR8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
KRTAP3-1Q9BYR8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC10.65□□□□□ -0.7
KRTAP3-1Q9BYR8 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-1Q9BYR8 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
KRTAP3-1Q9BYR8 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-1Q9BYR8 AK3-203ENST00000447596 705 ntTSL 2 BASIC10.65□□□□□ -0.7
KRTAP3-1Q9BYR8 RARRES2P1-201ENST00000474487 481 ntBASIC10.65□□□□□ -0.7
KRTAP3-1Q9BYR8 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-1Q9BYR8 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC10.65□□□□□ -0.7
KRTAP3-1Q9BYR8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-1Q9BYR8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-1Q9BYR8 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-1Q9BYR8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
KRTAP3-1Q9BYR8 AC112907.3-201ENST00000577781 2400 ntBASIC10.65□□□□□ -0.71
KRTAP3-1Q9BYR8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
KRTAP3-1Q9BYR8 PKD1P6-201ENST00000343738 4769 ntBASIC10.65□□□□□ -0.71
KRTAP3-1Q9BYR8 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
KRTAP3-1Q9BYR8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.71
KRTAP3-1Q9BYR8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.71
KRTAP3-1Q9BYR8 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
KRTAP3-1Q9BYR8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-1Q9BYR8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-1Q9BYR8 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-1Q9BYR8 AC020907.5-201ENST00000624372 1936 ntBASIC10.64□□□□□ -0.71
KRTAP3-1Q9BYR8 AC121338.2-201ENST00000622535 1744 ntBASIC10.64□□□□□ -0.71
KRTAP3-1Q9BYR8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC10.64□□□□□ -0.71
KRTAP3-1Q9BYR8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-1Q9BYR8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-1Q9BYR8 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
KRTAP3-1Q9BYR8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-1Q9BYR8 AC007225.1-201ENST00000566331 1836 ntBASIC10.64□□□□□ -0.71
KRTAP3-1Q9BYR8 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-1Q9BYR8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC10.64□□□□□ -0.71
KRTAP3-1Q9BYR8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-1Q9BYR8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
KRTAP3-1Q9BYR8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
KRTAP3-1Q9BYR8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC10.64□□□□□ -0.71
KRTAP3-1Q9BYR8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC10.64□□□□□ -0.71
KRTAP3-1Q9BYR8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC10.64□□□□□ -0.71
KRTAP3-1Q9BYR8 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
KRTAP3-1Q9BYR8 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
KRTAP3-1Q9BYR8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC10.64□□□□□ -0.71
KRTAP3-1Q9BYR8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-1Q9BYR8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-1Q9BYR8 AL162377.1-201ENST00000618844 1793 ntBASIC10.64□□□□□ -0.71
KRTAP3-1Q9BYR8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC10.64□□□□□ -0.71
KRTAP3-1Q9BYR8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-1Q9BYR8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
KRTAP3-1Q9BYR8 STX5-203ENST00000394690 1568 ntTSL 5 BASIC10.64□□□□□ -0.71
KRTAP3-1Q9BYR8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC10.64□□□□□ -0.71
KRTAP3-1Q9BYR8 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP3-1Q9BYR8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
KRTAP3-1Q9BYR8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC10.63□□□□□ -0.71
KRTAP3-1Q9BYR8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC10.63□□□□□ -0.71
KRTAP3-1Q9BYR8 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC10.63□□□□□ -0.71
KRTAP3-1Q9BYR8 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP3-1Q9BYR8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC10.63□□□□□ -0.71
KRTAP3-1Q9BYR8 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP3-1Q9BYR8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC10.63□□□□□ -0.71
KRTAP3-1Q9BYR8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
KRTAP3-1Q9BYR8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP3-1Q9BYR8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
KRTAP3-1Q9BYR8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
KRTAP3-1Q9BYR8 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC10.63□□□□□ -0.71
KRTAP3-1Q9BYR8 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP3-1Q9BYR8 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP3-1Q9BYR8 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
KRTAP3-1Q9BYR8 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC10.63□□□□□ -0.71
KRTAP3-1Q9BYR8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP3-1Q9BYR8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC10.63□□□□□ -0.71
KRTAP3-1Q9BYR8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC10.63□□□□□ -0.71
KRTAP3-1Q9BYR8 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP3-1Q9BYR8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP3-1Q9BYR8 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms