Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC12.45□□□□□ -0.42
LIMD2Q9BT23 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
LIMD2Q9BT23 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LIMD2Q9BT23 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LIMD2Q9BT23 OXCT2P1-201ENST00000447263 1535 ntBASIC12.45□□□□□ -0.42
LIMD2Q9BT23 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
LIMD2Q9BT23 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC12.45□□□□□ -0.42
LIMD2Q9BT23 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
LIMD2Q9BT23 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
LIMD2Q9BT23 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC12.45□□□□□ -0.42
LIMD2Q9BT23 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LIMD2Q9BT23 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
LIMD2Q9BT23 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
LIMD2Q9BT23 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LIMD2Q9BT23 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
LIMD2Q9BT23 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC12.45□□□□□ -0.42
LIMD2Q9BT23 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIMD2Q9BT23 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LIMD2Q9BT23 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LIMD2Q9BT23 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIMD2Q9BT23 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC12.44□□□□□ -0.42
LIMD2Q9BT23 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC12.44□□□□□ -0.42
LIMD2Q9BT23 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LIMD2Q9BT23 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIMD2Q9BT23 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIMD2Q9BT23 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIMD2Q9BT23 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LIMD2Q9BT23 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
LIMD2Q9BT23 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
LIMD2Q9BT23 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC12.44□□□□□ -0.42
LIMD2Q9BT23 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LIMD2Q9BT23 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
LIMD2Q9BT23 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC12.44□□□□□ -0.42
LIMD2Q9BT23 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC12.44□□□□□ -0.42
LIMD2Q9BT23 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
LIMD2Q9BT23 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIMD2Q9BT23 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIMD2Q9BT23 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIMD2Q9BT23 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
LIMD2Q9BT23 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIMD2Q9BT23 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIMD2Q9BT23 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIMD2Q9BT23 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIMD2Q9BT23 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC12.44□□□□□ -0.42
LIMD2Q9BT23 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIMD2Q9BT23 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC12.44□□□□□ -0.42
LIMD2Q9BT23 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LIMD2Q9BT23 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LIMD2Q9BT23 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIMD2Q9BT23 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC12.43□□□□□ -0.42
LIMD2Q9BT23 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
LIMD2Q9BT23 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIMD2Q9BT23 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIMD2Q9BT23 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC12.43□□□□□ -0.42
LIMD2Q9BT23 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LIMD2Q9BT23 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIMD2Q9BT23 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIMD2Q9BT23 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LIMD2Q9BT23 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LIMD2Q9BT23 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC12.43□□□□□ -0.42
LIMD2Q9BT23 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIMD2Q9BT23 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIMD2Q9BT23 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIMD2Q9BT23 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC12.43□□□□□ -0.42
LIMD2Q9BT23 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC12.43□□□□□ -0.42
LIMD2Q9BT23 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC12.43□□□□□ -0.42
LIMD2Q9BT23 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC12.43□□□□□ -0.42
LIMD2Q9BT23 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIMD2Q9BT23 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIMD2Q9BT23 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIMD2Q9BT23 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC12.43□□□□□ -0.42
LIMD2Q9BT23 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIMD2Q9BT23 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIMD2Q9BT23 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIMD2Q9BT23 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIMD2Q9BT23 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LIMD2Q9BT23 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIMD2Q9BT23 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
LIMD2Q9BT23 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIMD2Q9BT23 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC12.43□□□□□ -0.42
LIMD2Q9BT23 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LIMD2Q9BT23 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LIMD2Q9BT23 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LIMD2Q9BT23 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LIMD2Q9BT23 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
LIMD2Q9BT23 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LIMD2Q9BT23 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LIMD2Q9BT23 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LIMD2Q9BT23 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LIMD2Q9BT23 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC12.42□□□□□ -0.42
LIMD2Q9BT23 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LIMD2Q9BT23 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
LIMD2Q9BT23 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LIMD2Q9BT23 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC12.42□□□□□ -0.42
LIMD2Q9BT23 BX842568.3-201ENST00000418104 571 ntBASIC12.42□□□□□ -0.42
LIMD2Q9BT23 AICDA-202ENST00000537228 667 ntTSL 5 BASIC12.42□□□□□ -0.42
LIMD2Q9BT23 AC104564.3-201ENST00000582367 638 ntBASIC12.42□□□□□ -0.42
LIMD2Q9BT23 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC12.42□□□□□ -0.42
LIMD2Q9BT23 AL136162.1-201ENST00000607711 1078 ntBASIC12.42□□□□□ -0.42
LIMD2Q9BT23 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms