Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.02■□□□□ 0.96
NDNQ99608 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
NDNQ99608 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
NDNQ99608 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
NDNQ99608 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
NDNQ99608 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NDNQ99608 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NDNQ99608 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NDNQ99608 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NDNQ99608 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NDNQ99608 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NDNQ99608 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.01■□□□□ 0.95
NDNQ99608 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NDNQ99608 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NDNQ99608 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
NDNQ99608 MIR572-201ENST00000384983 95 ntBASIC21.01■□□□□ 0.95
NDNQ99608 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
NDNQ99608 SUDS3P1-201ENST00000505831 966 ntBASIC21.01■□□□□ 0.95
NDNQ99608 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.01■□□□□ 0.95
NDNQ99608 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NDNQ99608 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.01■□□□□ 0.95
NDNQ99608 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.01■□□□□ 0.95
NDNQ99608 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NDNQ99608 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.01■□□□□ 0.95
NDNQ99608 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NDNQ99608 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.01■□□□□ 0.95
NDNQ99608 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
NDNQ99608 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NDNQ99608 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NDNQ99608 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NDNQ99608 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NDNQ99608 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21■□□□□ 0.95
NDNQ99608 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
NDNQ99608 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
NDNQ99608 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21■□□□□ 0.95
NDNQ99608 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NDNQ99608 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21■□□□□ 0.95
NDNQ99608 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21■□□□□ 0.95
NDNQ99608 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21■□□□□ 0.95
NDNQ99608 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
NDNQ99608 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21■□□□□ 0.95
NDNQ99608 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NDNQ99608 RALB-208ENST00000631312 311 ntTSL 5 BASIC21■□□□□ 0.95
NDNQ99608 AC009237.3-201ENST00000393279 1427 ntBASIC21■□□□□ 0.95
NDNQ99608 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
NDNQ99608 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NDNQ99608 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NDNQ99608 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
NDNQ99608 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NDNQ99608 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
NDNQ99608 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.99■□□□□ 0.95
NDNQ99608 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
NDNQ99608 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NDNQ99608 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NDNQ99608 AC055733.4-201ENST00000638462 1354 ntBASIC20.99■□□□□ 0.95
NDNQ99608 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
NDNQ99608 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
NDNQ99608 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.99■□□□□ 0.95
NDNQ99608 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
NDNQ99608 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.99■□□□□ 0.95
NDNQ99608 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.99■□□□□ 0.95
NDNQ99608 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.99■□□□□ 0.95
NDNQ99608 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.99■□□□□ 0.95
NDNQ99608 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NDNQ99608 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.99■□□□□ 0.95
NDNQ99608 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.99■□□□□ 0.95
NDNQ99608 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
NDNQ99608 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NDNQ99608 AC005224.4-201ENST00000583262 1652 ntBASIC20.99■□□□□ 0.95
NDNQ99608 BX005040.4-201ENST00000637145 1518 ntBASIC20.99■□□□□ 0.95
NDNQ99608 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.98■□□□□ 0.95
NDNQ99608 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NDNQ99608 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
NDNQ99608 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
NDNQ99608 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.98■□□□□ 0.95
NDNQ99608 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NDNQ99608 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NDNQ99608 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NDNQ99608 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NDNQ99608 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NDNQ99608 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NDNQ99608 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NDNQ99608 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NDNQ99608 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NDNQ99608 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.97■□□□□ 0.95
NDNQ99608 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
NDNQ99608 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NDNQ99608 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NDNQ99608 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.97■□□□□ 0.95
NDNQ99608 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NDNQ99608 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.97■□□□□ 0.95
NDNQ99608 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
NDNQ99608 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NDNQ99608 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NDNQ99608 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
NDNQ99608 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NDNQ99608 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.97■□□□□ 0.95
NDNQ99608 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.97■□□□□ 0.95
NDNQ99608 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.97■□□□□ 0.95
NDNQ99608 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms