Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NR1H4Q96RI1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NR1H4Q96RI1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
NR1H4Q96RI1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.79■□□□□ 0.76
NR1H4Q96RI1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NR1H4Q96RI1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
NR1H4Q96RI1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.78■□□□□ 0.76
NR1H4Q96RI1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NR1H4Q96RI1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NR1H4Q96RI1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NR1H4Q96RI1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NR1H4Q96RI1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NR1H4Q96RI1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.78■□□□□ 0.76
NR1H4Q96RI1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NR1H4Q96RI1 AC018755.3-202ENST00000596210 929 ntBASIC19.78■□□□□ 0.76
NR1H4Q96RI1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NR1H4Q96RI1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NR1H4Q96RI1 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
NR1H4Q96RI1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.78■□□□□ 0.76
NR1H4Q96RI1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NR1H4Q96RI1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NR1H4Q96RI1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NR1H4Q96RI1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NR1H4Q96RI1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.77■□□□□ 0.76
NR1H4Q96RI1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.77■□□□□ 0.76
NR1H4Q96RI1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.77■□□□□ 0.76
NR1H4Q96RI1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NR1H4Q96RI1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.77■□□□□ 0.76
NR1H4Q96RI1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NR1H4Q96RI1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
NR1H4Q96RI1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NR1H4Q96RI1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NR1H4Q96RI1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.77■□□□□ 0.76
NR1H4Q96RI1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NR1H4Q96RI1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
NR1H4Q96RI1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NR1H4Q96RI1 AL592293.1-201ENST00000502889 1188 ntBASIC19.77■□□□□ 0.76
NR1H4Q96RI1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.77■□□□□ 0.76
NR1H4Q96RI1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.77■□□□□ 0.75
NR1H4Q96RI1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.77■□□□□ 0.75
NR1H4Q96RI1 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
NR1H4Q96RI1 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.77■□□□□ 0.75
NR1H4Q96RI1 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NR1H4Q96RI1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.76■□□□□ 0.75
NR1H4Q96RI1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.76■□□□□ 0.75
NR1H4Q96RI1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
NR1H4Q96RI1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NR1H4Q96RI1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NR1H4Q96RI1 AC116562.4-201ENST00000641316 2276 ntBASIC19.76■□□□□ 0.75
NR1H4Q96RI1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NR1H4Q96RI1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NR1H4Q96RI1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NR1H4Q96RI1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NR1H4Q96RI1 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NR1H4Q96RI1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NR1H4Q96RI1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NR1H4Q96RI1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NR1H4Q96RI1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.76■□□□□ 0.75
NR1H4Q96RI1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NR1H4Q96RI1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NR1H4Q96RI1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
NR1H4Q96RI1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NR1H4Q96RI1 AP000974.1-201ENST00000623909 2387 ntBASIC19.76■□□□□ 0.75
NR1H4Q96RI1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NR1H4Q96RI1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NR1H4Q96RI1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NR1H4Q96RI1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.75■□□□□ 0.75
NR1H4Q96RI1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NR1H4Q96RI1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
NR1H4Q96RI1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
NR1H4Q96RI1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NR1H4Q96RI1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NR1H4Q96RI1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NR1H4Q96RI1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
NR1H4Q96RI1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
NR1H4Q96RI1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.74■□□□□ 0.75
NR1H4Q96RI1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NR1H4Q96RI1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NR1H4Q96RI1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NR1H4Q96RI1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NR1H4Q96RI1 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.74■□□□□ 0.75
NR1H4Q96RI1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NR1H4Q96RI1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.74■□□□□ 0.75
NR1H4Q96RI1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NR1H4Q96RI1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.74■□□□□ 0.75
NR1H4Q96RI1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NR1H4Q96RI1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NR1H4Q96RI1 AC004408.2-201ENST00000623613 2777 ntBASIC19.73■□□□□ 0.75
NR1H4Q96RI1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NR1H4Q96RI1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.73■□□□□ 0.75
NR1H4Q96RI1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
NR1H4Q96RI1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
NR1H4Q96RI1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
NR1H4Q96RI1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NR1H4Q96RI1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
NR1H4Q96RI1 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
NR1H4Q96RI1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NR1H4Q96RI1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
NR1H4Q96RI1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NR1H4Q96RI1 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms