Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.05■□□□□ 0.64
SNX18Q96RF0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX18Q96RF0 EDA-201ENST00000338901 1233 ntBASIC19.05■□□□□ 0.64
SNX18Q96RF0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX18Q96RF0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNX18Q96RF0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.05■□□□□ 0.64
SNX18Q96RF0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SNX18Q96RF0 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SNX18Q96RF0 AL355001.2-201ENST00000620617 1191 ntBASIC19.05■□□□□ 0.64
SNX18Q96RF0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SNX18Q96RF0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SNX18Q96RF0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.05■□□□□ 0.64
SNX18Q96RF0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SNX18Q96RF0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SNX18Q96RF0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.04■□□□□ 0.64
SNX18Q96RF0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.04■□□□□ 0.64
SNX18Q96RF0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX18Q96RF0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX18Q96RF0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.04■□□□□ 0.64
SNX18Q96RF0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.04■□□□□ 0.64
SNX18Q96RF0 BX842568.3-201ENST00000418104 571 ntBASIC19.04■□□□□ 0.64
SNX18Q96RF0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
SNX18Q96RF0 AL031432.3-201ENST00000607698 485 ntBASIC19.04■□□□□ 0.64
SNX18Q96RF0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.04■□□□□ 0.64
SNX18Q96RF0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX18Q96RF0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX18Q96RF0 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNX18Q96RF0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
SNX18Q96RF0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.04■□□□□ 0.64
SNX18Q96RF0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX18Q96RF0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNX18Q96RF0 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX18Q96RF0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX18Q96RF0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX18Q96RF0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNX18Q96RF0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX18Q96RF0 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX18Q96RF0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SNX18Q96RF0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX18Q96RF0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX18Q96RF0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SNX18Q96RF0 SUDS3P1-201ENST00000505831 966 ntBASIC19.03■□□□□ 0.64
SNX18Q96RF0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.03■□□□□ 0.64
SNX18Q96RF0 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.03■□□□□ 0.64
SNX18Q96RF0 AP004607.7-201ENST00000527152 1677 ntBASIC19.03■□□□□ 0.64
SNX18Q96RF0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX18Q96RF0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX18Q96RF0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.03■□□□□ 0.64
SNX18Q96RF0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX18Q96RF0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX18Q96RF0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNX18Q96RF0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.02■□□□□ 0.64
SNX18Q96RF0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
SNX18Q96RF0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SNX18Q96RF0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
SNX18Q96RF0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNX18Q96RF0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNX18Q96RF0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNX18Q96RF0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
SNX18Q96RF0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.02■□□□□ 0.64
SNX18Q96RF0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.02■□□□□ 0.64
SNX18Q96RF0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
SNX18Q96RF0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SNX18Q96RF0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
SNX18Q96RF0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.02■□□□□ 0.63
SNX18Q96RF0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.02■□□□□ 0.63
SNX18Q96RF0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
SNX18Q96RF0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX18Q96RF0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX18Q96RF0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SNX18Q96RF0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX18Q96RF0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.01■□□□□ 0.63
SNX18Q96RF0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX18Q96RF0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.01■□□□□ 0.63
SNX18Q96RF0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SNX18Q96RF0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX18Q96RF0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNX18Q96RF0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX18Q96RF0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNX18Q96RF0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.01■□□□□ 0.63
SNX18Q96RF0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNX18Q96RF0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNX18Q96RF0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.01■□□□□ 0.63
SNX18Q96RF0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.01■□□□□ 0.63
SNX18Q96RF0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SNX18Q96RF0 AF213884.3-201ENST00000563833 479 ntBASIC19.01■□□□□ 0.63
SNX18Q96RF0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SNX18Q96RF0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
SNX18Q96RF0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.01■□□□□ 0.63
SNX18Q96RF0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNX18Q96RF0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX18Q96RF0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX18Q96RF0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNX18Q96RF0 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNX18Q96RF0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19■□□□□ 0.63
SNX18Q96RF0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNX18Q96RF0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19■□□□□ 0.63
SNX18Q96RF0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNX18Q96RF0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SNX18Q96RF0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms