Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDCA5Q96FF9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
CDCA5Q96FF9 AC091799.1-201ENST00000422823 811 ntBASIC24.88■■□□□ 1.57
CDCA5Q96FF9 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC24.88■■□□□ 1.57
CDCA5Q96FF9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC24.88■■□□□ 1.57
CDCA5Q96FF9 AC092368.3-202ENST00000574180 1591 ntBASIC24.88■■□□□ 1.57
CDCA5Q96FF9 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CDCA5Q96FF9 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CDCA5Q96FF9 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC24.87■■□□□ 1.57
CDCA5Q96FF9 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CDCA5Q96FF9 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC24.87■■□□□ 1.57
CDCA5Q96FF9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
CDCA5Q96FF9 LINC01023-201ENST00000606054 436 ntBASIC24.87■■□□□ 1.57
CDCA5Q96FF9 AL589743.5-201ENST00000616611 1050 ntBASIC24.87■■□□□ 1.57
CDCA5Q96FF9 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
CDCA5Q96FF9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC24.87■■□□□ 1.57
CDCA5Q96FF9 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CDCA5Q96FF9 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CDCA5Q96FF9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC24.86■■□□□ 1.57
CDCA5Q96FF9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
CDCA5Q96FF9 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CDCA5Q96FF9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC24.86■■□□□ 1.57
CDCA5Q96FF9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CDCA5Q96FF9 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC24.86■■□□□ 1.57
CDCA5Q96FF9 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC24.86■■□□□ 1.57
CDCA5Q96FF9 RPS20-210ENST00000523936 899 ntTSL 2 BASIC24.86■■□□□ 1.57
CDCA5Q96FF9 MAX-217ENST00000557277 728 ntTSL 3 BASIC24.86■■□□□ 1.57
CDCA5Q96FF9 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC24.86■■□□□ 1.57
CDCA5Q96FF9 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC24.86■■□□□ 1.57
CDCA5Q96FF9 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
CDCA5Q96FF9 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CDCA5Q96FF9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
CDCA5Q96FF9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CDCA5Q96FF9 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC24.85■■□□□ 1.57
CDCA5Q96FF9 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CDCA5Q96FF9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CDCA5Q96FF9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
CDCA5Q96FF9 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CDCA5Q96FF9 AC137767.1-201ENST00000602918 1920 ntBASIC24.85■■□□□ 1.57
CDCA5Q96FF9 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CDCA5Q96FF9 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CDCA5Q96FF9 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC24.85■■□□□ 1.57
CDCA5Q96FF9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC24.85■■□□□ 1.57
CDCA5Q96FF9 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC24.85■■□□□ 1.57
CDCA5Q96FF9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC24.85■■□□□ 1.57
CDCA5Q96FF9 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CDCA5Q96FF9 AC069544.1-201ENST00000609399 999 ntBASIC24.85■■□□□ 1.57
CDCA5Q96FF9 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CDCA5Q96FF9 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC24.85■■□□□ 1.57
CDCA5Q96FF9 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC24.85■■□□□ 1.57
CDCA5Q96FF9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC24.85■■□□□ 1.57
CDCA5Q96FF9 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CDCA5Q96FF9 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
CDCA5Q96FF9 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
CDCA5Q96FF9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC24.84■■□□□ 1.57
CDCA5Q96FF9 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CDCA5Q96FF9 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC24.84■■□□□ 1.57
CDCA5Q96FF9 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
CDCA5Q96FF9 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC24.84■■□□□ 1.57
CDCA5Q96FF9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CDCA5Q96FF9 SOX15-203ENST00000570788 1093 ntBASIC24.84■■□□□ 1.57
CDCA5Q96FF9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC24.83■■□□□ 1.57
CDCA5Q96FF9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CDCA5Q96FF9 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC24.83■■□□□ 1.57
CDCA5Q96FF9 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
CDCA5Q96FF9 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC24.83■■□□□ 1.57
CDCA5Q96FF9 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
CDCA5Q96FF9 MDFI-202ENST00000373050 809 ntTSL 2 BASIC24.83■■□□□ 1.57
CDCA5Q96FF9 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC24.83■■□□□ 1.57
CDCA5Q96FF9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC24.83■■□□□ 1.57
CDCA5Q96FF9 KRT18P21-201ENST00000515767 1272 ntBASIC24.83■■□□□ 1.57
CDCA5Q96FF9 CBFB-203ENST00000561924 584 ntTSL 5 BASIC24.83■■□□□ 1.57
CDCA5Q96FF9 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CDCA5Q96FF9 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CDCA5Q96FF9 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CDCA5Q96FF9 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
CDCA5Q96FF9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CDCA5Q96FF9 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC24.82■■□□□ 1.56
CDCA5Q96FF9 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CDCA5Q96FF9 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC24.82■■□□□ 1.56
CDCA5Q96FF9 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CDCA5Q96FF9 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CDCA5Q96FF9 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
CDCA5Q96FF9 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
CDCA5Q96FF9 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC24.82■■□□□ 1.56
CDCA5Q96FF9 CDV3P1-201ENST00000471403 739 ntBASIC24.82■■□□□ 1.56
CDCA5Q96FF9 SLC29A4P2-201ENST00000504749 1089 ntBASIC24.82■■□□□ 1.56
CDCA5Q96FF9 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
CDCA5Q96FF9 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC24.82■■□□□ 1.56
CDCA5Q96FF9 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC24.82■■□□□ 1.56
CDCA5Q96FF9 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CDCA5Q96FF9 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
CDCA5Q96FF9 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CDCA5Q96FF9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.82■■□□□ 1.56
CDCA5Q96FF9 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC24.82■■□□□ 1.56
CDCA5Q96FF9 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CDCA5Q96FF9 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC24.82■■□□□ 1.56
CDCA5Q96FF9 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CDCA5Q96FF9 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CDCA5Q96FF9 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC24.81■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms