Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM116Q8NCL8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM116Q8NCL8 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM116Q8NCL8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
TMEM116Q8NCL8 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TMEM116Q8NCL8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM116Q8NCL8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM116Q8NCL8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TMEM116Q8NCL8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.57■□□□□ 0.24
TMEM116Q8NCL8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM116Q8NCL8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.57■□□□□ 0.24
TMEM116Q8NCL8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TMEM116Q8NCL8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM116Q8NCL8 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.57■□□□□ 0.24
TMEM116Q8NCL8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM116Q8NCL8 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16.57■□□□□ 0.24
TMEM116Q8NCL8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
TMEM116Q8NCL8 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16.57■□□□□ 0.24
TMEM116Q8NCL8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM116Q8NCL8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM116Q8NCL8 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TMEM116Q8NCL8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM116Q8NCL8 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM116Q8NCL8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM116Q8NCL8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.57■□□□□ 0.24
TMEM116Q8NCL8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM116Q8NCL8 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM116Q8NCL8 AL049796.1-201ENST00000565336 1766 ntBASIC16.56■□□□□ 0.24
TMEM116Q8NCL8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM116Q8NCL8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM116Q8NCL8 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM116Q8NCL8 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.56■□□□□ 0.24
TMEM116Q8NCL8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM116Q8NCL8 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.56■□□□□ 0.24
TMEM116Q8NCL8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TMEM116Q8NCL8 BX842568.3-201ENST00000418104 571 ntBASIC16.56■□□□□ 0.24
TMEM116Q8NCL8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.56■□□□□ 0.24
TMEM116Q8NCL8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TMEM116Q8NCL8 AC233992.3-201ENST00000607491 485 ntBASIC16.56■□□□□ 0.24
TMEM116Q8NCL8 AC106739.1-201ENST00000617035 715 ntBASIC16.56■□□□□ 0.24
TMEM116Q8NCL8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TMEM116Q8NCL8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM116Q8NCL8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.56■□□□□ 0.24
TMEM116Q8NCL8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM116Q8NCL8 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.56■□□□□ 0.24
TMEM116Q8NCL8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TMEM116Q8NCL8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM116Q8NCL8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TMEM116Q8NCL8 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.56■□□□□ 0.24
TMEM116Q8NCL8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM116Q8NCL8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM116Q8NCL8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.55■□□□□ 0.24
TMEM116Q8NCL8 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM116Q8NCL8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEM116Q8NCL8 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.55■□□□□ 0.24
TMEM116Q8NCL8 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM116Q8NCL8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM116Q8NCL8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEM116Q8NCL8 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM116Q8NCL8 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM116Q8NCL8 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TMEM116Q8NCL8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TMEM116Q8NCL8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEM116Q8NCL8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM116Q8NCL8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEM116Q8NCL8 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.55■□□□□ 0.24
TMEM116Q8NCL8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC16.55■□□□□ 0.24
TMEM116Q8NCL8 RALB-208ENST00000631312 311 ntTSL 5 BASIC16.55■□□□□ 0.24
TMEM116Q8NCL8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEM116Q8NCL8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TMEM116Q8NCL8 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM116Q8NCL8 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEM116Q8NCL8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM116Q8NCL8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM116Q8NCL8 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.55■□□□□ 0.24
TMEM116Q8NCL8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEM116Q8NCL8 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEM116Q8NCL8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM116Q8NCL8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM116Q8NCL8 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TMEM116Q8NCL8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM116Q8NCL8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM116Q8NCL8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TMEM116Q8NCL8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC16.54■□□□□ 0.24
TMEM116Q8NCL8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TMEM116Q8NCL8 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.54■□□□□ 0.24
TMEM116Q8NCL8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM116Q8NCL8 AC133561.4-201ENST00000566112 224 ntBASIC16.54■□□□□ 0.24
TMEM116Q8NCL8 AC126544.1-201ENST00000580842 1059 ntBASIC16.54■□□□□ 0.24
TMEM116Q8NCL8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.54■□□□□ 0.24
TMEM116Q8NCL8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TMEM116Q8NCL8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM116Q8NCL8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TMEM116Q8NCL8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.54■□□□□ 0.24
TMEM116Q8NCL8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM116Q8NCL8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM116Q8NCL8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TMEM116Q8NCL8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM116Q8NCL8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TMEM116Q8NCL8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms