Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
EFCAB3Q8N7B9 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EFCAB3Q8N7B9 RNF165-205ENST00000588679 2904 ntBASIC20.73■□□□□ 0.91
EFCAB3Q8N7B9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EFCAB3Q8N7B9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EFCAB3Q8N7B9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
EFCAB3Q8N7B9 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EFCAB3Q8N7B9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
EFCAB3Q8N7B9 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.72■□□□□ 0.91
EFCAB3Q8N7B9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.72■□□□□ 0.91
EFCAB3Q8N7B9 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
EFCAB3Q8N7B9 BX842568.3-201ENST00000418104 571 ntBASIC20.72■□□□□ 0.91
EFCAB3Q8N7B9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.72■□□□□ 0.91
EFCAB3Q8N7B9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
EFCAB3Q8N7B9 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.72■□□□□ 0.91
EFCAB3Q8N7B9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EFCAB3Q8N7B9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.72■□□□□ 0.91
EFCAB3Q8N7B9 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.72■□□□□ 0.91
EFCAB3Q8N7B9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
EFCAB3Q8N7B9 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
EFCAB3Q8N7B9 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
EFCAB3Q8N7B9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
EFCAB3Q8N7B9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
EFCAB3Q8N7B9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.71■□□□□ 0.91
EFCAB3Q8N7B9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
EFCAB3Q8N7B9 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EFCAB3Q8N7B9 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
EFCAB3Q8N7B9 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.71■□□□□ 0.91
EFCAB3Q8N7B9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.71■□□□□ 0.91
EFCAB3Q8N7B9 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.71■□□□□ 0.91
EFCAB3Q8N7B9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.71■□□□□ 0.91
EFCAB3Q8N7B9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.71■□□□□ 0.91
EFCAB3Q8N7B9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.71■□□□□ 0.91
EFCAB3Q8N7B9 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.71■□□□□ 0.91
EFCAB3Q8N7B9 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EFCAB3Q8N7B9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
EFCAB3Q8N7B9 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFCAB3Q8N7B9 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFCAB3Q8N7B9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFCAB3Q8N7B9 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFCAB3Q8N7B9 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
EFCAB3Q8N7B9 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EFCAB3Q8N7B9 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EFCAB3Q8N7B9 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EFCAB3Q8N7B9 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.7■□□□□ 0.9
EFCAB3Q8N7B9 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EFCAB3Q8N7B9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EFCAB3Q8N7B9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.7■□□□□ 0.9
EFCAB3Q8N7B9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.7■□□□□ 0.9
EFCAB3Q8N7B9 LINC01521-201ENST00000504184 1943 ntBASIC20.7■□□□□ 0.9
EFCAB3Q8N7B9 LINC01006-201ENST00000333319 2292 ntBASIC20.7■□□□□ 0.9
EFCAB3Q8N7B9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
EFCAB3Q8N7B9 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFCAB3Q8N7B9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EFCAB3Q8N7B9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EFCAB3Q8N7B9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EFCAB3Q8N7B9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EFCAB3Q8N7B9 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.69■□□□□ 0.9
EFCAB3Q8N7B9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EFCAB3Q8N7B9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.69■□□□□ 0.9
EFCAB3Q8N7B9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EFCAB3Q8N7B9 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.69■□□□□ 0.9
EFCAB3Q8N7B9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
EFCAB3Q8N7B9 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EFCAB3Q8N7B9 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
EFCAB3Q8N7B9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EFCAB3Q8N7B9 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EFCAB3Q8N7B9 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.69■□□□□ 0.9
EFCAB3Q8N7B9 YBX1P1-201ENST00000445822 960 ntBASIC20.69■□□□□ 0.9
EFCAB3Q8N7B9 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.69■□□□□ 0.9
EFCAB3Q8N7B9 AC126544.1-201ENST00000580842 1059 ntBASIC20.69■□□□□ 0.9
EFCAB3Q8N7B9 AL031602.1-201ENST00000633169 911 ntBASIC20.69■□□□□ 0.9
EFCAB3Q8N7B9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
EFCAB3Q8N7B9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
EFCAB3Q8N7B9 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
EFCAB3Q8N7B9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EFCAB3Q8N7B9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EFCAB3Q8N7B9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
EFCAB3Q8N7B9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFCAB3Q8N7B9 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFCAB3Q8N7B9 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
EFCAB3Q8N7B9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFCAB3Q8N7B9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFCAB3Q8N7B9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.68■□□□□ 0.9
EFCAB3Q8N7B9 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFCAB3Q8N7B9 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.68■□□□□ 0.9
EFCAB3Q8N7B9 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
EFCAB3Q8N7B9 KRT18P5-201ENST00000436075 1291 ntBASIC20.68■□□□□ 0.9
EFCAB3Q8N7B9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.68■□□□□ 0.9
EFCAB3Q8N7B9 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFCAB3Q8N7B9 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFCAB3Q8N7B9 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
EFCAB3Q8N7B9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFCAB3Q8N7B9 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFCAB3Q8N7B9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFCAB3Q8N7B9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EFCAB3Q8N7B9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
EFCAB3Q8N7B9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EFCAB3Q8N7B9 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EFCAB3Q8N7B9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms