Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LINC00346Q8IVM7 AC005224.4-201ENST00000583262 1652 ntBASIC18.59■□□□□ 0.57
LINC00346Q8IVM7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LINC00346Q8IVM7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LINC00346Q8IVM7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LINC00346Q8IVM7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LINC00346Q8IVM7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LINC00346Q8IVM7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LINC00346Q8IVM7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
LINC00346Q8IVM7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
LINC00346Q8IVM7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LINC00346Q8IVM7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LINC00346Q8IVM7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.58■□□□□ 0.57
LINC00346Q8IVM7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LINC00346Q8IVM7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LINC00346Q8IVM7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.58■□□□□ 0.57
LINC00346Q8IVM7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.58■□□□□ 0.56
LINC00346Q8IVM7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.58■□□□□ 0.56
LINC00346Q8IVM7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LINC00346Q8IVM7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LINC00346Q8IVM7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.58■□□□□ 0.56
LINC00346Q8IVM7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC00346Q8IVM7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC00346Q8IVM7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC00346Q8IVM7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.57■□□□□ 0.56
LINC00346Q8IVM7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC00346Q8IVM7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC00346Q8IVM7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC00346Q8IVM7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
LINC00346Q8IVM7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
LINC00346Q8IVM7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LINC00346Q8IVM7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC00346Q8IVM7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC00346Q8IVM7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.57■□□□□ 0.56
LINC00346Q8IVM7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LINC00346Q8IVM7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.56■□□□□ 0.56
LINC00346Q8IVM7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
LINC00346Q8IVM7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.56■□□□□ 0.56
LINC00346Q8IVM7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
LINC00346Q8IVM7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC00346Q8IVM7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC00346Q8IVM7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC00346Q8IVM7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC00346Q8IVM7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.56■□□□□ 0.56
LINC00346Q8IVM7 AL049796.1-201ENST00000565336 1766 ntBASIC18.56■□□□□ 0.56
LINC00346Q8IVM7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.56■□□□□ 0.56
LINC00346Q8IVM7 AC142381.2-201ENST00000566120 298 ntBASIC18.56■□□□□ 0.56
LINC00346Q8IVM7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.56■□□□□ 0.56
LINC00346Q8IVM7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.56■□□□□ 0.56
LINC00346Q8IVM7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.56■□□□□ 0.56
LINC00346Q8IVM7 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC00346Q8IVM7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.56■□□□□ 0.56
LINC00346Q8IVM7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC00346Q8IVM7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.55■□□□□ 0.56
LINC00346Q8IVM7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.55■□□□□ 0.56
LINC00346Q8IVM7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.55■□□□□ 0.56
LINC00346Q8IVM7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.55■□□□□ 0.56
LINC00346Q8IVM7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC00346Q8IVM7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC00346Q8IVM7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.55■□□□□ 0.56
LINC00346Q8IVM7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.55■□□□□ 0.56
LINC00346Q8IVM7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
LINC00346Q8IVM7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.55■□□□□ 0.56
LINC00346Q8IVM7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC00346Q8IVM7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC00346Q8IVM7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC00346Q8IVM7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.55■□□□□ 0.56
LINC00346Q8IVM7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.55■□□□□ 0.56
LINC00346Q8IVM7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.55■□□□□ 0.56
LINC00346Q8IVM7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC00346Q8IVM7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LINC00346Q8IVM7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC00346Q8IVM7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC00346Q8IVM7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LINC00346Q8IVM7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC00346Q8IVM7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
LINC00346Q8IVM7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC00346Q8IVM7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.54■□□□□ 0.56
LINC00346Q8IVM7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC00346Q8IVM7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LINC00346Q8IVM7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC00346Q8IVM7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC00346Q8IVM7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.54■□□□□ 0.56
LINC00346Q8IVM7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.54■□□□□ 0.56
LINC00346Q8IVM7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.54■□□□□ 0.56
LINC00346Q8IVM7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.54■□□□□ 0.56
LINC00346Q8IVM7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.54■□□□□ 0.56
LINC00346Q8IVM7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC00346Q8IVM7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LINC00346Q8IVM7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC00346Q8IVM7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.54■□□□□ 0.56
LINC00346Q8IVM7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC00346Q8IVM7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC00346Q8IVM7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC00346Q8IVM7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.53■□□□□ 0.56
LINC00346Q8IVM7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINC00346Q8IVM7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LINC00346Q8IVM7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINC00346Q8IVM7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINC00346Q8IVM7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms