Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00575Q6W349 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC13.31□□□□□ -0.28
LINC00575Q6W349 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00575Q6W349 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC13.31□□□□□ -0.28
LINC00575Q6W349 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00575Q6W349 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00575Q6W349 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00575Q6W349 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00575Q6W349 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00575Q6W349 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00575Q6W349 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00575Q6W349 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00575Q6W349 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC13.31□□□□□ -0.28
LINC00575Q6W349 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
LINC00575Q6W349 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00575Q6W349 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LINC00575Q6W349 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00575Q6W349 AC087289.5-201ENST00000586076 3175 ntBASIC13.3□□□□□ -0.28
LINC00575Q6W349 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00575Q6W349 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00575Q6W349 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC00575Q6W349 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
LINC00575Q6W349 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00575Q6W349 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00575Q6W349 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC13.3□□□□□ -0.28
LINC00575Q6W349 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LINC00575Q6W349 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00575Q6W349 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00575Q6W349 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
LINC00575Q6W349 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
LINC00575Q6W349 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00575Q6W349 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00575Q6W349 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC13.3□□□□□ -0.28
LINC00575Q6W349 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00575Q6W349 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
LINC00575Q6W349 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00575Q6W349 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LINC00575Q6W349 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00575Q6W349 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00575Q6W349 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00575Q6W349 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00575Q6W349 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00575Q6W349 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC00575Q6W349 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00575Q6W349 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00575Q6W349 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00575Q6W349 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00575Q6W349 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00575Q6W349 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LINC00575Q6W349 IDNK-201ENST00000376417 511 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC00575Q6W349 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00575Q6W349 TK2-202ENST00000417693 1046 ntTSL 2 BASIC13.29□□□□□ -0.28
LINC00575Q6W349 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
LINC00575Q6W349 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LINC00575Q6W349 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC13.29□□□□□ -0.28
LINC00575Q6W349 NKILA-201ENST00000613231 537 ntTSL 4 BASIC13.29□□□□□ -0.28
LINC00575Q6W349 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC13.29□□□□□ -0.28
LINC00575Q6W349 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
LINC00575Q6W349 AL020996.1-203ENST00000536896 2307 ntBASIC13.29□□□□□ -0.28
LINC00575Q6W349 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00575Q6W349 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00575Q6W349 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00575Q6W349 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC13.29□□□□□ -0.28
LINC00575Q6W349 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00575Q6W349 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00575Q6W349 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
LINC00575Q6W349 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
LINC00575Q6W349 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LINC00575Q6W349 BID-204ENST00000399767 2129 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC00575Q6W349 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00575Q6W349 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00575Q6W349 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
LINC00575Q6W349 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00575Q6W349 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC00575Q6W349 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00575Q6W349 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC13.28□□□□□ -0.28
LINC00575Q6W349 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LINC00575Q6W349 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00575Q6W349 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00575Q6W349 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC13.28□□□□□ -0.28
LINC00575Q6W349 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC13.28□□□□□ -0.28
LINC00575Q6W349 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LINC00575Q6W349 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC13.28□□□□□ -0.28
LINC00575Q6W349 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
LINC00575Q6W349 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00575Q6W349 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LINC00575Q6W349 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00575Q6W349 ERF-202ENST00000440177 2032 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC00575Q6W349 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC13.28□□□□□ -0.28
LINC00575Q6W349 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC13.28□□□□□ -0.28
LINC00575Q6W349 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00575Q6W349 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LINC00575Q6W349 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
LINC00575Q6W349 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LINC00575Q6W349 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
LINC00575Q6W349 PLK5-205ENST00000642079 1969 ntBASIC13.27□□□□□ -0.28
LINC00575Q6W349 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC00575Q6W349 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
LINC00575Q6W349 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
LINC00575Q6W349 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms