Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 GLDC-219ENST00000640208 420 ntTSL 2 BASIC24.15■■□□□ 1.46
COL13A1Q5TAT6 RBM17P2-201ENST00000616397 1405 ntBASIC24.15■■□□□ 1.46
COL13A1Q5TAT6 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.15■■□□□ 1.46
COL13A1Q5TAT6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC24.15■■□□□ 1.46
COL13A1Q5TAT6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
COL13A1Q5TAT6 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
COL13A1Q5TAT6 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
COL13A1Q5TAT6 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
COL13A1Q5TAT6 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
COL13A1Q5TAT6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
COL13A1Q5TAT6 BX664615.1-201ENST00000443558 458 ntBASIC24.14■■□□□ 1.45
COL13A1Q5TAT6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC24.14■■□□□ 1.45
COL13A1Q5TAT6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
COL13A1Q5TAT6 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
COL13A1Q5TAT6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
COL13A1Q5TAT6 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
COL13A1Q5TAT6 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
COL13A1Q5TAT6 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
COL13A1Q5TAT6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL13A1Q5TAT6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC24.13■■□□□ 1.45
COL13A1Q5TAT6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
COL13A1Q5TAT6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL13A1Q5TAT6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
COL13A1Q5TAT6 RBM17P1-201ENST00000453646 1190 ntBASIC24.13■■□□□ 1.45
COL13A1Q5TAT6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL13A1Q5TAT6 CLEC4GP1-201ENST00000596555 870 ntBASIC24.13■■□□□ 1.45
COL13A1Q5TAT6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
COL13A1Q5TAT6 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC24.13■■□□□ 1.45
COL13A1Q5TAT6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL13A1Q5TAT6 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL13A1Q5TAT6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.13■■□□□ 1.45
COL13A1Q5TAT6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
COL13A1Q5TAT6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL13A1Q5TAT6 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.12■■□□□ 1.45
COL13A1Q5TAT6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
COL13A1Q5TAT6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
COL13A1Q5TAT6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
COL13A1Q5TAT6 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
COL13A1Q5TAT6 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
COL13A1Q5TAT6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
COL13A1Q5TAT6 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
COL13A1Q5TAT6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC24.12■■□□□ 1.45
COL13A1Q5TAT6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC24.12■■□□□ 1.45
COL13A1Q5TAT6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC24.12■■□□□ 1.45
COL13A1Q5TAT6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC24.12■■□□□ 1.45
COL13A1Q5TAT6 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
COL13A1Q5TAT6 AP000525.1-201ENST00000608286 694 ntBASIC24.12■■□□□ 1.45
COL13A1Q5TAT6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC24.12■■□□□ 1.45
COL13A1Q5TAT6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
COL13A1Q5TAT6 CYP2D8P-201ENST00000433633 1490 ntBASIC24.12■■□□□ 1.45
COL13A1Q5TAT6 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
COL13A1Q5TAT6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.11■■□□□ 1.45
COL13A1Q5TAT6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
COL13A1Q5TAT6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
COL13A1Q5TAT6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
COL13A1Q5TAT6 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
COL13A1Q5TAT6 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
COL13A1Q5TAT6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC24.11■■□□□ 1.45
COL13A1Q5TAT6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC24.11■■□□□ 1.45
COL13A1Q5TAT6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC24.11■■□□□ 1.45
COL13A1Q5TAT6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC24.11■■□□□ 1.45
COL13A1Q5TAT6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
COL13A1Q5TAT6 AC010203.1-204ENST00000548782 407 ntBASIC24.11■■□□□ 1.45
COL13A1Q5TAT6 KLK8-205ENST00000593490 267 ntTSL 3 BASIC24.11■■□□□ 1.45
COL13A1Q5TAT6 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC24.11■■□□□ 1.45
COL13A1Q5TAT6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
COL13A1Q5TAT6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
COL13A1Q5TAT6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
COL13A1Q5TAT6 AC092803.2-201ENST00000564287 1899 ntBASIC24.11■■□□□ 1.45
COL13A1Q5TAT6 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC24.1■■□□□ 1.45
COL13A1Q5TAT6 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
COL13A1Q5TAT6 MIR1238-201ENST00000408483 83 ntBASIC24.1■■□□□ 1.45
COL13A1Q5TAT6 NAPSB-206ENST00000562112 1266 ntBASIC24.1■■□□□ 1.45
COL13A1Q5TAT6 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC24.1■■□□□ 1.45
COL13A1Q5TAT6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
COL13A1Q5TAT6 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
COL13A1Q5TAT6 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
COL13A1Q5TAT6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC24.1■■□□□ 1.45
COL13A1Q5TAT6 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC24.1■■□□□ 1.45
COL13A1Q5TAT6 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.09■■□□□ 1.45
COL13A1Q5TAT6 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
COL13A1Q5TAT6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC24.09■■□□□ 1.45
COL13A1Q5TAT6 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC24.09■■□□□ 1.45
COL13A1Q5TAT6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC24.09■■□□□ 1.45
COL13A1Q5TAT6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC24.09■■□□□ 1.45
COL13A1Q5TAT6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
COL13A1Q5TAT6 AC120498.10-201ENST00000621827 505 ntBASIC24.09■■□□□ 1.45
COL13A1Q5TAT6 AP000550.4-202ENST00000639755 178 ntBASIC24.09■■□□□ 1.45
COL13A1Q5TAT6 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
COL13A1Q5TAT6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC24.09■■□□□ 1.45
COL13A1Q5TAT6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
COL13A1Q5TAT6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC24.08■■□□□ 1.45
COL13A1Q5TAT6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.08■■□□□ 1.45
COL13A1Q5TAT6 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
COL13A1Q5TAT6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC24.08■■□□□ 1.45
COL13A1Q5TAT6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC24.08■■□□□ 1.45
COL13A1Q5TAT6 AL034346.1-201ENST00000568244 1277 ntBASIC24.08■■□□□ 1.45
COL13A1Q5TAT6 AC053503.5-201ENST00000601508 636 ntBASIC24.08■■□□□ 1.45
COL13A1Q5TAT6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC24.08■■□□□ 1.45
COL13A1Q5TAT6 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.08■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms