Protein–RNA interactions for Protein: P54108

CRISP3, Cysteine-rich secretory protein 3, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRISP3P54108 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CRISP3P54108 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CRISP3P54108 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.66■□□□□ 0.74
CRISP3P54108 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CRISP3P54108 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CRISP3P54108 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CRISP3P54108 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CRISP3P54108 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CRISP3P54108 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CRISP3P54108 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CRISP3P54108 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CRISP3P54108 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CRISP3P54108 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.65■□□□□ 0.74
CRISP3P54108 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CRISP3P54108 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.65■□□□□ 0.74
CRISP3P54108 AC106739.1-201ENST00000617035 715 ntBASIC19.65■□□□□ 0.74
CRISP3P54108 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CRISP3P54108 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CRISP3P54108 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CRISP3P54108 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.65■□□□□ 0.74
CRISP3P54108 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CRISP3P54108 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.64■□□□□ 0.74
CRISP3P54108 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CRISP3P54108 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CRISP3P54108 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CRISP3P54108 EDA-201ENST00000338901 1233 ntBASIC19.64■□□□□ 0.73
CRISP3P54108 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CRISP3P54108 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.64■□□□□ 0.73
CRISP3P54108 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.64■□□□□ 0.73
CRISP3P54108 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.64■□□□□ 0.73
CRISP3P54108 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.64■□□□□ 0.73
CRISP3P54108 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.64■□□□□ 0.73
CRISP3P54108 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.64■□□□□ 0.73
CRISP3P54108 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.64■□□□□ 0.73
CRISP3P54108 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.64■□□□□ 0.73
CRISP3P54108 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CRISP3P54108 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CRISP3P54108 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CRISP3P54108 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CRISP3P54108 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CRISP3P54108 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CRISP3P54108 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CRISP3P54108 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CRISP3P54108 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CRISP3P54108 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CRISP3P54108 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CRISP3P54108 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CRISP3P54108 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.63■□□□□ 0.73
CRISP3P54108 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CRISP3P54108 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CRISP3P54108 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.63■□□□□ 0.73
CRISP3P54108 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CRISP3P54108 TSPY26P-201ENST00000476365 1326 ntBASIC19.63■□□□□ 0.73
CRISP3P54108 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.63■□□□□ 0.73
CRISP3P54108 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
CRISP3P54108 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
CRISP3P54108 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.63■□□□□ 0.73
CRISP3P54108 AC105233.4-201ENST00000642045 216 ntBASIC19.63■□□□□ 0.73
CRISP3P54108 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CRISP3P54108 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CRISP3P54108 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CRISP3P54108 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.63■□□□□ 0.73
CRISP3P54108 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CRISP3P54108 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CRISP3P54108 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CRISP3P54108 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CRISP3P54108 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CRISP3P54108 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.62■□□□□ 0.73
CRISP3P54108 AL049796.1-201ENST00000565336 1766 ntBASIC19.62■□□□□ 0.73
CRISP3P54108 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CRISP3P54108 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CRISP3P54108 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CRISP3P54108 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.62■□□□□ 0.73
CRISP3P54108 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CRISP3P54108 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CRISP3P54108 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CRISP3P54108 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CRISP3P54108 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CRISP3P54108 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.62■□□□□ 0.73
CRISP3P54108 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CRISP3P54108 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CRISP3P54108 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CRISP3P54108 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.61■□□□□ 0.73
CRISP3P54108 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.61■□□□□ 0.73
CRISP3P54108 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.61■□□□□ 0.73
CRISP3P54108 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.61■□□□□ 0.73
CRISP3P54108 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CRISP3P54108 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CRISP3P54108 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CRISP3P54108 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CRISP3P54108 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CRISP3P54108 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CRISP3P54108 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CRISP3P54108 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CRISP3P54108 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CRISP3P54108 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CRISP3P54108 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.61■□□□□ 0.73
CRISP3P54108 AP001330.3-201ENST00000520123 633 ntBASIC19.61■□□□□ 0.73
CRISP3P54108 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CRISP3P54108 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms