Protein–RNA interactions for Protein: P13073

COX4I1, Cytochrome c oxidase subunit 4 isoform 1, mitochondrial, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1P13073 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
COX4I1P13073 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COX4I1P13073 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COX4I1P13073 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COX4I1P13073 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
COX4I1P13073 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
COX4I1P13073 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
COX4I1P13073 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COX4I1P13073 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.25■□□□□ 0.83
COX4I1P13073 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.25■□□□□ 0.83
COX4I1P13073 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.25■□□□□ 0.83
COX4I1P13073 AC027702.1-201ENST00000563810 1770 ntBASIC20.25■□□□□ 0.83
COX4I1P13073 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COX4I1P13073 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.25■□□□□ 0.83
COX4I1P13073 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COX4I1P13073 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COX4I1P13073 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COX4I1P13073 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COX4I1P13073 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.25■□□□□ 0.83
COX4I1P13073 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COX4I1P13073 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
COX4I1P13073 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.24■□□□□ 0.83
COX4I1P13073 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COX4I1P13073 AC006455.2-201ENST00000429931 906 ntBASIC20.24■□□□□ 0.83
COX4I1P13073 AC010141.3-201ENST00000456659 717 ntBASIC20.24■□□□□ 0.83
COX4I1P13073 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.24■□□□□ 0.83
COX4I1P13073 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COX4I1P13073 AL117332.1-201ENST00000622628 974 ntBASIC20.24■□□□□ 0.83
COX4I1P13073 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COX4I1P13073 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COX4I1P13073 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COX4I1P13073 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COX4I1P13073 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COX4I1P13073 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COX4I1P13073 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COX4I1P13073 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COX4I1P13073 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
COX4I1P13073 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
COX4I1P13073 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COX4I1P13073 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COX4I1P13073 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COX4I1P13073 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COX4I1P13073 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
COX4I1P13073 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COX4I1P13073 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
COX4I1P13073 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.23■□□□□ 0.83
COX4I1P13073 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
COX4I1P13073 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.23■□□□□ 0.83
COX4I1P13073 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.23■□□□□ 0.83
COX4I1P13073 AC010997.5-201ENST00000609182 354 ntBASIC20.23■□□□□ 0.83
COX4I1P13073 AC012354.3-201ENST00000623734 483 ntBASIC20.23■□□□□ 0.83
COX4I1P13073 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
COX4I1P13073 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
COX4I1P13073 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
COX4I1P13073 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.22■□□□□ 0.83
COX4I1P13073 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.22■□□□□ 0.83
COX4I1P13073 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
COX4I1P13073 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COX4I1P13073 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.22■□□□□ 0.83
COX4I1P13073 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.22■□□□□ 0.83
COX4I1P13073 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COX4I1P13073 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COX4I1P13073 AP004607.7-201ENST00000527152 1677 ntBASIC20.22■□□□□ 0.83
COX4I1P13073 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
COX4I1P13073 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COX4I1P13073 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
COX4I1P13073 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COX4I1P13073 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.21■□□□□ 0.83
COX4I1P13073 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
COX4I1P13073 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.21■□□□□ 0.83
COX4I1P13073 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.21■□□□□ 0.83
COX4I1P13073 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
COX4I1P13073 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COX4I1P13073 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COX4I1P13073 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
COX4I1P13073 KRT125P-201ENST00000546827 989 ntBASIC20.21■□□□□ 0.83
COX4I1P13073 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COX4I1P13073 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.21■□□□□ 0.83
COX4I1P13073 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
COX4I1P13073 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
COX4I1P13073 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
COX4I1P13073 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COX4I1P13073 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.2■□□□□ 0.82
COX4I1P13073 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COX4I1P13073 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
COX4I1P13073 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COX4I1P13073 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COX4I1P13073 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COX4I1P13073 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.2■□□□□ 0.82
COX4I1P13073 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
COX4I1P13073 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COX4I1P13073 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COX4I1P13073 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.2■□□□□ 0.82
COX4I1P13073 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.2■□□□□ 0.82
COX4I1P13073 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.2■□□□□ 0.82
COX4I1P13073 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.2■□□□□ 0.82
COX4I1P13073 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.2■□□□□ 0.82
COX4I1P13073 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
COX4I1P13073 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COX4I1P13073 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms