Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MRPL3P09001 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
MRPL3P09001 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.81■□□□□ 0.6
MRPL3P09001 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MRPL3P09001 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MRPL3P09001 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MRPL3P09001 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MRPL3P09001 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.81■□□□□ 0.6
MRPL3P09001 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
MRPL3P09001 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MRPL3P09001 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MRPL3P09001 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MRPL3P09001 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
MRPL3P09001 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MRPL3P09001 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
MRPL3P09001 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
MRPL3P09001 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MRPL3P09001 AP006587.3-201ENST00000525742 1516 ntBASIC18.8■□□□□ 0.6
MRPL3P09001 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MRPL3P09001 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MRPL3P09001 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.8■□□□□ 0.6
MRPL3P09001 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MRPL3P09001 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MRPL3P09001 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MRPL3P09001 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
MRPL3P09001 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.8■□□□□ 0.6
MRPL3P09001 AC136469.2-201ENST00000623944 1028 ntBASIC18.8■□□□□ 0.6
MRPL3P09001 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MRPL3P09001 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MRPL3P09001 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MRPL3P09001 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MRPL3P09001 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MRPL3P09001 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MRPL3P09001 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MRPL3P09001 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRPL3P09001 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
MRPL3P09001 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRPL3P09001 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRPL3P09001 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRPL3P09001 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRPL3P09001 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRPL3P09001 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRPL3P09001 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRPL3P09001 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRPL3P09001 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRPL3P09001 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRPL3P09001 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRPL3P09001 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRPL3P09001 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.79■□□□□ 0.6
MRPL3P09001 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.79■□□□□ 0.6
MRPL3P09001 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRPL3P09001 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MRPL3P09001 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MRPL3P09001 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.79■□□□□ 0.6
MRPL3P09001 MIR4466-201ENST00000606121 54 ntBASIC18.79■□□□□ 0.6
MRPL3P09001 AL138724.1-201ENST00000606771 1088 ntBASIC18.79■□□□□ 0.6
MRPL3P09001 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRPL3P09001 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRPL3P09001 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MRPL3P09001 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.78■□□□□ 0.6
MRPL3P09001 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.78■□□□□ 0.6
MRPL3P09001 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MRPL3P09001 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.78■□□□□ 0.6
MRPL3P09001 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MRPL3P09001 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MRPL3P09001 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.78■□□□□ 0.6
MRPL3P09001 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
MRPL3P09001 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.78■□□□□ 0.6
MRPL3P09001 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
MRPL3P09001 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.78■□□□□ 0.6
MRPL3P09001 AP005435.1-201ENST00000529293 1178 ntBASIC18.78■□□□□ 0.6
MRPL3P09001 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.78■□□□□ 0.6
MRPL3P09001 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MRPL3P09001 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MRPL3P09001 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.77■□□□□ 0.6
MRPL3P09001 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.77■□□□□ 0.6
MRPL3P09001 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
MRPL3P09001 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MRPL3P09001 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MRPL3P09001 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
MRPL3P09001 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MRPL3P09001 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
MRPL3P09001 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.77■□□□□ 0.6
MRPL3P09001 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MRPL3P09001 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
MRPL3P09001 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MRPL3P09001 AL356441.2-201ENST00000443009 864 ntBASIC18.77■□□□□ 0.6
MRPL3P09001 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MRPL3P09001 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MRPL3P09001 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.77■□□□□ 0.6
MRPL3P09001 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MRPL3P09001 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MRPL3P09001 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MRPL3P09001 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MRPL3P09001 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MRPL3P09001 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MRPL3P09001 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MRPL3P09001 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
MRPL3P09001 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.76■□□□□ 0.59
MRPL3P09001 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms