Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HTR1AP08908 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.18■□□□□ 0.66
HTR1AP08908 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HTR1AP08908 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.18■□□□□ 0.66
HTR1AP08908 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HTR1AP08908 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HTR1AP08908 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HTR1AP08908 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HTR1AP08908 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.18■□□□□ 0.66
HTR1AP08908 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HTR1AP08908 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HTR1AP08908 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HTR1AP08908 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HTR1AP08908 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HTR1AP08908 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
HTR1AP08908 AC027702.1-201ENST00000563810 1770 ntBASIC19.17■□□□□ 0.66
HTR1AP08908 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HTR1AP08908 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HTR1AP08908 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HTR1AP08908 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.17■□□□□ 0.66
HTR1AP08908 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
HTR1AP08908 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
HTR1AP08908 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HTR1AP08908 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
HTR1AP08908 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
HTR1AP08908 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.17■□□□□ 0.66
HTR1AP08908 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HTR1AP08908 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HTR1AP08908 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HTR1AP08908 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
HTR1AP08908 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HTR1AP08908 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HTR1AP08908 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HTR1AP08908 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.16■□□□□ 0.66
HTR1AP08908 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HTR1AP08908 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HTR1AP08908 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HTR1AP08908 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HTR1AP08908 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HTR1AP08908 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HTR1AP08908 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
HTR1AP08908 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HTR1AP08908 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HTR1AP08908 AC079089.2-201ENST00000531211 1277 ntBASIC19.16■□□□□ 0.66
HTR1AP08908 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.16■□□□□ 0.66
HTR1AP08908 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.16■□□□□ 0.66
HTR1AP08908 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
HTR1AP08908 AC112907.3-201ENST00000577781 2400 ntBASIC19.16■□□□□ 0.66
HTR1AP08908 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HTR1AP08908 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.16■□□□□ 0.66
HTR1AP08908 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HTR1AP08908 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.16■□□□□ 0.66
HTR1AP08908 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.16■□□□□ 0.66
HTR1AP08908 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HTR1AP08908 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HTR1AP08908 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HTR1AP08908 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
HTR1AP08908 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HTR1AP08908 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HTR1AP08908 AC009102.2-201ENST00000606772 1639 ntBASIC19.15■□□□□ 0.66
HTR1AP08908 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
HTR1AP08908 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
HTR1AP08908 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.15■□□□□ 0.66
HTR1AP08908 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HTR1AP08908 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HTR1AP08908 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HTR1AP08908 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.15■□□□□ 0.66
HTR1AP08908 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HTR1AP08908 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HTR1AP08908 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HTR1AP08908 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.66
HTR1AP08908 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.66
HTR1AP08908 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
HTR1AP08908 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
HTR1AP08908 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HTR1AP08908 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HTR1AP08908 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HTR1AP08908 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HTR1AP08908 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
HTR1AP08908 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HTR1AP08908 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.14■□□□□ 0.65
HTR1AP08908 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HTR1AP08908 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
HTR1AP08908 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HTR1AP08908 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HTR1AP08908 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.14■□□□□ 0.65
HTR1AP08908 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
HTR1AP08908 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HTR1AP08908 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.13■□□□□ 0.65
HTR1AP08908 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HTR1AP08908 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
HTR1AP08908 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
HTR1AP08908 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
HTR1AP08908 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HTR1AP08908 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.13■□□□□ 0.65
HTR1AP08908 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
HTR1AP08908 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
HTR1AP08908 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HTR1AP08908 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HTR1AP08908 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms