Protein–RNA interactions for Protein: P06028

GYPB, Glycophorin-B, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GYPBP06028 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.84■□□□□ 0.61
GYPBP06028 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.84■□□□□ 0.61
GYPBP06028 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.84■□□□□ 0.61
GYPBP06028 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.84■□□□□ 0.61
GYPBP06028 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GYPBP06028 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GYPBP06028 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GYPBP06028 LINC01521-201ENST00000504184 1943 ntBASIC18.84■□□□□ 0.61
GYPBP06028 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GYPBP06028 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GYPBP06028 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.83■□□□□ 0.61
GYPBP06028 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GYPBP06028 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
GYPBP06028 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.83■□□□□ 0.61
GYPBP06028 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GYPBP06028 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GYPBP06028 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GYPBP06028 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
GYPBP06028 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
GYPBP06028 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
GYPBP06028 UNC93B3-201ENST00000308076 687 ntBASIC18.83■□□□□ 0.6
GYPBP06028 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GYPBP06028 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.83■□□□□ 0.6
GYPBP06028 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GYPBP06028 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GYPBP06028 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
GYPBP06028 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GYPBP06028 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.83■□□□□ 0.6
GYPBP06028 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.83■□□□□ 0.6
GYPBP06028 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GYPBP06028 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
GYPBP06028 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GYPBP06028 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GYPBP06028 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.83■□□□□ 0.6
GYPBP06028 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GYPBP06028 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GYPBP06028 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GYPBP06028 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.83■□□□□ 0.6
GYPBP06028 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.83■□□□□ 0.6
GYPBP06028 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GYPBP06028 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GYPBP06028 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GYPBP06028 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
GYPBP06028 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GYPBP06028 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GYPBP06028 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GYPBP06028 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
GYPBP06028 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GYPBP06028 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GYPBP06028 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GYPBP06028 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
GYPBP06028 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.82■□□□□ 0.6
GYPBP06028 BX842568.3-201ENST00000418104 571 ntBASIC18.82■□□□□ 0.6
GYPBP06028 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GYPBP06028 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.82■□□□□ 0.6
GYPBP06028 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
GYPBP06028 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
GYPBP06028 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.82■□□□□ 0.6
GYPBP06028 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
GYPBP06028 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.82■□□□□ 0.6
GYPBP06028 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GYPBP06028 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
GYPBP06028 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GYPBP06028 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.81■□□□□ 0.6
GYPBP06028 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.81■□□□□ 0.6
GYPBP06028 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GYPBP06028 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GYPBP06028 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GYPBP06028 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GYPBP06028 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.81■□□□□ 0.6
GYPBP06028 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
GYPBP06028 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GYPBP06028 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GYPBP06028 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GYPBP06028 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.81■□□□□ 0.6
GYPBP06028 AC092667.1-201ENST00000434301 2586 ntBASIC18.81■□□□□ 0.6
GYPBP06028 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GYPBP06028 FEM1AP1-201ENST00000431297 1995 ntBASIC18.81■□□□□ 0.6
GYPBP06028 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GYPBP06028 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GYPBP06028 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GYPBP06028 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GYPBP06028 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GYPBP06028 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GYPBP06028 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
GYPBP06028 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
GYPBP06028 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.8■□□□□ 0.6
GYPBP06028 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GYPBP06028 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GYPBP06028 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GYPBP06028 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GYPBP06028 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
GYPBP06028 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GYPBP06028 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GYPBP06028 AC024257.2-201ENST00000549699 147 ntBASIC18.8■□□□□ 0.6
GYPBP06028 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.8■□□□□ 0.6
GYPBP06028 AC126544.1-201ENST00000580842 1059 ntBASIC18.8■□□□□ 0.6
GYPBP06028 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.8■□□□□ 0.6
GYPBP06028 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GYPBP06028 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms