Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
APOC3P02656 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
APOC3P02656 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.97■□□□□ 0.31
APOC3P02656 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.97■□□□□ 0.31
APOC3P02656 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
APOC3P02656 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.97■□□□□ 0.31
APOC3P02656 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
APOC3P02656 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
APOC3P02656 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
APOC3P02656 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
APOC3P02656 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.96■□□□□ 0.31
APOC3P02656 MIR219A2-201ENST00000608502 1504 ntBASIC16.96■□□□□ 0.31
APOC3P02656 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.96■□□□□ 0.31
APOC3P02656 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
APOC3P02656 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
APOC3P02656 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
APOC3P02656 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.96■□□□□ 0.31
APOC3P02656 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
APOC3P02656 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
APOC3P02656 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
APOC3P02656 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
APOC3P02656 AP002365.1-201ENST00000603448 772 ntBASIC16.96■□□□□ 0.31
APOC3P02656 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
APOC3P02656 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
APOC3P02656 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
APOC3P02656 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.96■□□□□ 0.3
APOC3P02656 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
APOC3P02656 OXCT2P1-201ENST00000447263 1535 ntBASIC16.96■□□□□ 0.3
APOC3P02656 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.95■□□□□ 0.3
APOC3P02656 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.95■□□□□ 0.3
APOC3P02656 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
APOC3P02656 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC16.95■□□□□ 0.3
APOC3P02656 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOC3P02656 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
APOC3P02656 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
APOC3P02656 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
APOC3P02656 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.95■□□□□ 0.3
APOC3P02656 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOC3P02656 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
APOC3P02656 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.94■□□□□ 0.3
APOC3P02656 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
APOC3P02656 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
APOC3P02656 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
APOC3P02656 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
APOC3P02656 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
APOC3P02656 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.94■□□□□ 0.3
APOC3P02656 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
APOC3P02656 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
APOC3P02656 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
APOC3P02656 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
APOC3P02656 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC16.94■□□□□ 0.3
APOC3P02656 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
APOC3P02656 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
APOC3P02656 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
APOC3P02656 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
APOC3P02656 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
APOC3P02656 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
APOC3P02656 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.94■□□□□ 0.3
APOC3P02656 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC16.94■□□□□ 0.3
APOC3P02656 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
APOC3P02656 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
APOC3P02656 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.93■□□□□ 0.3
APOC3P02656 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
APOC3P02656 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
APOC3P02656 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.93■□□□□ 0.3
APOC3P02656 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
APOC3P02656 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
APOC3P02656 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
APOC3P02656 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
APOC3P02656 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
APOC3P02656 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
APOC3P02656 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
APOC3P02656 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
APOC3P02656 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.93■□□□□ 0.3
APOC3P02656 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
APOC3P02656 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
APOC3P02656 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
APOC3P02656 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
APOC3P02656 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
APOC3P02656 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.92■□□□□ 0.3
APOC3P02656 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.92■□□□□ 0.3
APOC3P02656 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
APOC3P02656 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
APOC3P02656 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.92■□□□□ 0.3
APOC3P02656 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
APOC3P02656 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
APOC3P02656 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
APOC3P02656 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
APOC3P02656 SETD8P1-201ENST00000623146 1180 ntBASIC16.92■□□□□ 0.3
APOC3P02656 CHML-205ENST00000638160 705 ntTSL 3 BASIC16.92■□□□□ 0.3
APOC3P02656 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
APOC3P02656 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
APOC3P02656 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
APOC3P02656 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.92■□□□□ 0.3
APOC3P02656 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
APOC3P02656 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
APOC3P02656 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.92■□□□□ 0.3
APOC3P02656 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
APOC3P02656 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APOC3P02656 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms