Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 AC091874.3-201ENST00000512672 1195 ntBASIC17.32■□□□□ 0.36
TGFAP01135 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.32■□□□□ 0.36
TGFAP01135 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.32■□□□□ 0.36
TGFAP01135 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TGFAP01135 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TGFAP01135 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.32■□□□□ 0.36
TGFAP01135 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TGFAP01135 MYC-209ENST00000641252 345 ntBASIC17.32■□□□□ 0.36
TGFAP01135 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TGFAP01135 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TGFAP01135 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TGFAP01135 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.32■□□□□ 0.36
TGFAP01135 AC061975.6-201ENST00000579045 1553 ntBASIC17.32■□□□□ 0.36
TGFAP01135 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TGFAP01135 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TGFAP01135 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TGFAP01135 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TGFAP01135 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TGFAP01135 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TGFAP01135 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TGFAP01135 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TGFAP01135 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TGFAP01135 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.31■□□□□ 0.36
TGFAP01135 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.31■□□□□ 0.36
TGFAP01135 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TGFAP01135 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TGFAP01135 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TGFAP01135 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TGFAP01135 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TGFAP01135 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TGFAP01135 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TGFAP01135 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.3■□□□□ 0.36
TGFAP01135 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.3■□□□□ 0.36
TGFAP01135 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.3■□□□□ 0.36
TGFAP01135 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TGFAP01135 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TGFAP01135 LSM12P1-201ENST00000411836 588 ntBASIC17.3■□□□□ 0.36
TGFAP01135 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
TGFAP01135 RPS2P52-201ENST00000469610 820 ntBASIC17.3■□□□□ 0.36
TGFAP01135 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TGFAP01135 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.3■□□□□ 0.36
TGFAP01135 AC243732.1-201ENST00000612648 864 ntBASIC17.3■□□□□ 0.36
TGFAP01135 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.3■□□□□ 0.36
TGFAP01135 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TGFAP01135 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TGFAP01135 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TGFAP01135 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TGFAP01135 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TGFAP01135 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TGFAP01135 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TGFAP01135 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.29■□□□□ 0.36
TGFAP01135 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.29■□□□□ 0.36
TGFAP01135 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TGFAP01135 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TGFAP01135 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.29■□□□□ 0.36
TGFAP01135 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TGFAP01135 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.29■□□□□ 0.36
TGFAP01135 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
TGFAP01135 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.29■□□□□ 0.36
TGFAP01135 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.29■□□□□ 0.36
TGFAP01135 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TGFAP01135 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.29■□□□□ 0.36
TGFAP01135 AC006058.3-201ENST00000606217 1069 ntBASIC17.29■□□□□ 0.36
TGFAP01135 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TGFAP01135 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TGFAP01135 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TGFAP01135 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TGFAP01135 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TGFAP01135 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TGFAP01135 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TGFAP01135 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TGFAP01135 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TGFAP01135 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
TGFAP01135 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TGFAP01135 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TGFAP01135 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.28■□□□□ 0.36
TGFAP01135 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.28■□□□□ 0.36
TGFAP01135 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.28■□□□□ 0.36
TGFAP01135 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TGFAP01135 AL158047.1-201ENST00000445918 881 ntBASIC17.28■□□□□ 0.36
TGFAP01135 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TGFAP01135 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.28■□□□□ 0.36
TGFAP01135 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TGFAP01135 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.28■□□□□ 0.36
TGFAP01135 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.28■□□□□ 0.36
TGFAP01135 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.28■□□□□ 0.36
TGFAP01135 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TGFAP01135 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TGFAP01135 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TGFAP01135 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TGFAP01135 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TGFAP01135 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TGFAP01135 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.27■□□□□ 0.36
TGFAP01135 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TGFAP01135 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TGFAP01135 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TGFAP01135 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TGFAP01135 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TGFAP01135 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TGFAP01135 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms