Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGA12O60330 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGA12O60330 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
PCDHGA12O60330 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGA12O60330 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
PCDHGA12O60330 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGA12O60330 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHGA12O60330 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHGA12O60330 RNA5SP413-201ENST00000516373 109 ntBASIC20.83■□□□□ 0.93
PCDHGA12O60330 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.83■□□□□ 0.93
PCDHGA12O60330 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
PCDHGA12O60330 AC008694.1-202ENST00000636953 945 ntBASIC20.83■□□□□ 0.93
PCDHGA12O60330 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHGA12O60330 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHGA12O60330 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHGA12O60330 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHGA12O60330 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA12O60330 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA12O60330 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA12O60330 KRT18P29-201ENST00000397031 1267 ntBASIC20.82■□□□□ 0.92
PCDHGA12O60330 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA12O60330 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.82■□□□□ 0.92
PCDHGA12O60330 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHGA12O60330 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PCDHGA12O60330 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.82■□□□□ 0.92
PCDHGA12O60330 AC069236.1-201ENST00000604339 616 ntBASIC20.82■□□□□ 0.92
PCDHGA12O60330 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.82■□□□□ 0.92
PCDHGA12O60330 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA12O60330 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDHGA12O60330 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA12O60330 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA12O60330 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA12O60330 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHGA12O60330 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PCDHGA12O60330 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA12O60330 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA12O60330 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA12O60330 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA12O60330 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA12O60330 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
PCDHGA12O60330 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA12O60330 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PCDHGA12O60330 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PCDHGA12O60330 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA12O60330 AC127496.7-201ENST00000625110 1798 ntBASIC20.81■□□□□ 0.92
PCDHGA12O60330 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA12O60330 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA12O60330 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHGA12O60330 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHGA12O60330 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PCDHGA12O60330 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGA12O60330 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGA12O60330 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDHGA12O60330 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGA12O60330 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PCDHGA12O60330 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHGA12O60330 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PCDHGA12O60330 AP006587.3-201ENST00000525742 1516 ntBASIC20.8■□□□□ 0.92
PCDHGA12O60330 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGA12O60330 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGA12O60330 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGA12O60330 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.8■□□□□ 0.92
PCDHGA12O60330 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHGA12O60330 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGA12O60330 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHGA12O60330 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHGA12O60330 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHGA12O60330 ECEL1P1-201ENST00000373592 1742 ntBASIC20.8■□□□□ 0.92
PCDHGA12O60330 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGA12O60330 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
PCDHGA12O60330 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGA12O60330 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHGA12O60330 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHGA12O60330 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHGA12O60330 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGA12O60330 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PCDHGA12O60330 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGA12O60330 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGA12O60330 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHGA12O60330 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
PCDHGA12O60330 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
PCDHGA12O60330 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.79■□□□□ 0.92
PCDHGA12O60330 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDHGA12O60330 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PCDHGA12O60330 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDHGA12O60330 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.79■□□□□ 0.92
PCDHGA12O60330 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDHGA12O60330 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGA12O60330 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHGA12O60330 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.79■□□□□ 0.92
PCDHGA12O60330 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
PCDHGA12O60330 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHGA12O60330 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGA12O60330 AC137767.1-201ENST00000602918 1920 ntBASIC20.78■□□□□ 0.92
PCDHGA12O60330 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDHGA12O60330 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGA12O60330 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDHGA12O60330 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGA12O60330 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHGA12O60330 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms