Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TSPAN4O14817 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TSPAN4O14817 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TSPAN4O14817 AC098818.2-201ENST00000564925 2320 ntBASIC17.51■□□□□ 0.39
TSPAN4O14817 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.51■□□□□ 0.39
TSPAN4O14817 AL451085.2-201ENST00000605085 799 ntBASIC17.51■□□□□ 0.39
TSPAN4O14817 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TSPAN4O14817 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.51■□□□□ 0.39
TSPAN4O14817 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.51■□□□□ 0.39
TSPAN4O14817 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TSPAN4O14817 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.51■□□□□ 0.39
TSPAN4O14817 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.51■□□□□ 0.39
TSPAN4O14817 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TSPAN4O14817 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TSPAN4O14817 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TSPAN4O14817 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TSPAN4O14817 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.51■□□□□ 0.39
TSPAN4O14817 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN4O14817 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN4O14817 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN4O14817 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN4O14817 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.5■□□□□ 0.39
TSPAN4O14817 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN4O14817 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN4O14817 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.5■□□□□ 0.39
TSPAN4O14817 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN4O14817 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN4O14817 AC020763.4-201ENST00000623414 4170 ntBASIC17.5■□□□□ 0.39
TSPAN4O14817 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN4O14817 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN4O14817 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TSPAN4O14817 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TSPAN4O14817 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN4O14817 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN4O14817 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN4O14817 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TSPAN4O14817 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TSPAN4O14817 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TSPAN4O14817 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TSPAN4O14817 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TSPAN4O14817 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TSPAN4O14817 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.49■□□□□ 0.39
TSPAN4O14817 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TSPAN4O14817 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TSPAN4O14817 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TSPAN4O14817 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TSPAN4O14817 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
TSPAN4O14817 AC137630.3-201ENST00000607245 391 ntBASIC17.49■□□□□ 0.39
TSPAN4O14817 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TSPAN4O14817 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TSPAN4O14817 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TSPAN4O14817 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TSPAN4O14817 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.49■□□□□ 0.39
TSPAN4O14817 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TSPAN4O14817 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
TSPAN4O14817 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TSPAN4O14817 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TSPAN4O14817 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TSPAN4O14817 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TSPAN4O14817 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TSPAN4O14817 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
TSPAN4O14817 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TSPAN4O14817 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TSPAN4O14817 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TSPAN4O14817 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TSPAN4O14817 BX664725.1-201ENST00000438252 379 ntBASIC17.48■□□□□ 0.39
TSPAN4O14817 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.48■□□□□ 0.39
TSPAN4O14817 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.48■□□□□ 0.39
TSPAN4O14817 AC009299.2-201ENST00000482477 511 ntBASIC17.48■□□□□ 0.39
TSPAN4O14817 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TSPAN4O14817 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TSPAN4O14817 Z92544.1-202ENST00000571933 1220 ntBASIC17.48■□□□□ 0.39
TSPAN4O14817 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TSPAN4O14817 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TSPAN4O14817 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TSPAN4O14817 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TSPAN4O14817 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TSPAN4O14817 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TSPAN4O14817 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TSPAN4O14817 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TSPAN4O14817 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TSPAN4O14817 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.48■□□□□ 0.39
TSPAN4O14817 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.48■□□□□ 0.39
TSPAN4O14817 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.47■□□□□ 0.39
TSPAN4O14817 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.47■□□□□ 0.39
TSPAN4O14817 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TSPAN4O14817 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
TSPAN4O14817 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TSPAN4O14817 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TSPAN4O14817 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TSPAN4O14817 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
TSPAN4O14817 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TSPAN4O14817 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TSPAN4O14817 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TSPAN4O14817 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TSPAN4O14817 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.47■□□□□ 0.39
TSPAN4O14817 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.47■□□□□ 0.39
TSPAN4O14817 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TSPAN4O14817 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TSPAN4O14817 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms