Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.7□□□□□ -0.06
TMEM238LA0A1B0GVL6 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM238LA0A1B0GVL6 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM238LA0A1B0GVL6 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM238LA0A1B0GVL6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TMEM238LA0A1B0GVL6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC14.7□□□□□ -0.06
TMEM238LA0A1B0GVL6 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM238LA0A1B0GVL6 AL122018.1-201ENST00000446607 2310 ntBASIC14.7□□□□□ -0.06
TMEM238LA0A1B0GVL6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM238LA0A1B0GVL6 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM238LA0A1B0GVL6 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TMEM238LA0A1B0GVL6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TMEM238LA0A1B0GVL6 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC14.7□□□□□ -0.06
TMEM238LA0A1B0GVL6 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TMEM238LA0A1B0GVL6 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC14.69□□□□□ -0.06
TMEM238LA0A1B0GVL6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC14.69□□□□□ -0.06
TMEM238LA0A1B0GVL6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC14.69□□□□□ -0.06
TMEM238LA0A1B0GVL6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM238LA0A1B0GVL6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.69□□□□□ -0.06
TMEM238LA0A1B0GVL6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
TMEM238LA0A1B0GVL6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC14.69□□□□□ -0.06
TMEM238LA0A1B0GVL6 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.69□□□□□ -0.06
TMEM238LA0A1B0GVL6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TMEM238LA0A1B0GVL6 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC14.69□□□□□ -0.06
TMEM238LA0A1B0GVL6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC14.69□□□□□ -0.06
TMEM238LA0A1B0GVL6 AC008813.1-201ENST00000536597 885 ntBASIC14.69□□□□□ -0.06
TMEM238LA0A1B0GVL6 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM238LA0A1B0GVL6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM238LA0A1B0GVL6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM238LA0A1B0GVL6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC14.69□□□□□ -0.06
TMEM238LA0A1B0GVL6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM238LA0A1B0GVL6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TMEM238LA0A1B0GVL6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM238LA0A1B0GVL6 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM238LA0A1B0GVL6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
TMEM238LA0A1B0GVL6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.69□□□□□ -0.06
TMEM238LA0A1B0GVL6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM238LA0A1B0GVL6 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM238LA0A1B0GVL6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.68□□□□□ -0.06
TMEM238LA0A1B0GVL6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM238LA0A1B0GVL6 BX323043.1-201ENST00000641006 1765 ntBASIC14.68□□□□□ -0.06
TMEM238LA0A1B0GVL6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM238LA0A1B0GVL6 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM238LA0A1B0GVL6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC14.68□□□□□ -0.06
TMEM238LA0A1B0GVL6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM238LA0A1B0GVL6 AC020763.4-201ENST00000623414 4170 ntBASIC14.68□□□□□ -0.06
TMEM238LA0A1B0GVL6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TMEM238LA0A1B0GVL6 AC148477.6-201ENST00000623746 465 ntBASIC14.68□□□□□ -0.06
TMEM238LA0A1B0GVL6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TMEM238LA0A1B0GVL6 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM238LA0A1B0GVL6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM238LA0A1B0GVL6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM238LA0A1B0GVL6 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.68□□□□□ -0.06
TMEM238LA0A1B0GVL6 AC018445.3-201ENST00000624177 1945 ntBASIC14.68□□□□□ -0.06
TMEM238LA0A1B0GVL6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM238LA0A1B0GVL6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC14.68□□□□□ -0.06
TMEM238LA0A1B0GVL6 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC14.68□□□□□ -0.06
TMEM238LA0A1B0GVL6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC14.68□□□□□ -0.06
TMEM238LA0A1B0GVL6 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM238LA0A1B0GVL6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC14.67□□□□□ -0.06
TMEM238LA0A1B0GVL6 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM238LA0A1B0GVL6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC14.67□□□□□ -0.06
TMEM238LA0A1B0GVL6 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM238LA0A1B0GVL6 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
TMEM238LA0A1B0GVL6 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.67□□□□□ -0.06
TMEM238LA0A1B0GVL6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM238LA0A1B0GVL6 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TMEM238LA0A1B0GVL6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM238LA0A1B0GVL6 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TMEM238LA0A1B0GVL6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM238LA0A1B0GVL6 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.67□□□□□ -0.06
TMEM238LA0A1B0GVL6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM238LA0A1B0GVL6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM238LA0A1B0GVL6 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM238LA0A1B0GVL6 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TMEM238LA0A1B0GVL6 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM238LA0A1B0GVL6 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC14.67□□□□□ -0.06
TMEM238LA0A1B0GVL6 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC14.67□□□□□ -0.06
TMEM238LA0A1B0GVL6 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM238LA0A1B0GVL6 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.67□□□□□ -0.06
TMEM238LA0A1B0GVL6 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM238LA0A1B0GVL6 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM238LA0A1B0GVL6 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM238LA0A1B0GVL6 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
TMEM238LA0A1B0GVL6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
TMEM238LA0A1B0GVL6 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC14.66□□□□□ -0.06
TMEM238LA0A1B0GVL6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM238LA0A1B0GVL6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM238LA0A1B0GVL6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
TMEM238LA0A1B0GVL6 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM238LA0A1B0GVL6 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM238LA0A1B0GVL6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TMEM238LA0A1B0GVL6 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TMEM238LA0A1B0GVL6 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TMEM238LA0A1B0GVL6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.66□□□□□ -0.06
TMEM238LA0A1B0GVL6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM238LA0A1B0GVL6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM238LA0A1B0GVL6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TMEM238LA0A1B0GVL6 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC14.66□□□□□ -0.06
TMEM238LA0A1B0GVL6 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms