Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC01558Q9Y6Z2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC10.99□□□□□ -0.65
LINC01558Q9Y6Z2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
LINC01558Q9Y6Z2 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01558Q9Y6Z2 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01558Q9Y6Z2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01558Q9Y6Z2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01558Q9Y6Z2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC01558Q9Y6Z2 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01558Q9Y6Z2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC01558Q9Y6Z2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01558Q9Y6Z2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
LINC01558Q9Y6Z2 AC073314.1-201ENST00000568729 2216 ntBASIC10.99□□□□□ -0.65
LINC01558Q9Y6Z2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01558Q9Y6Z2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01558Q9Y6Z2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC01558Q9Y6Z2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01558Q9Y6Z2 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC10.98□□□□□ -0.65
LINC01558Q9Y6Z2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01558Q9Y6Z2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
LINC01558Q9Y6Z2 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
LINC01558Q9Y6Z2 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01558Q9Y6Z2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
LINC01558Q9Y6Z2 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01558Q9Y6Z2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC01558Q9Y6Z2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01558Q9Y6Z2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC10.98□□□□□ -0.65
LINC01558Q9Y6Z2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01558Q9Y6Z2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
LINC01558Q9Y6Z2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01558Q9Y6Z2 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
LINC01558Q9Y6Z2 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01558Q9Y6Z2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC10.98□□□□□ -0.65
LINC01558Q9Y6Z2 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC10.98□□□□□ -0.65
LINC01558Q9Y6Z2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01558Q9Y6Z2 ME2-216ENST00000639850 2331 ntTSL 5 BASIC10.98□□□□□ -0.65
LINC01558Q9Y6Z2 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01558Q9Y6Z2 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01558Q9Y6Z2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC10.98□□□□□ -0.65
LINC01558Q9Y6Z2 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01558Q9Y6Z2 OXCT2P1-201ENST00000447263 1535 ntBASIC10.98□□□□□ -0.65
LINC01558Q9Y6Z2 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01558Q9Y6Z2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
LINC01558Q9Y6Z2 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01558Q9Y6Z2 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
LINC01558Q9Y6Z2 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01558Q9Y6Z2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC01558Q9Y6Z2 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC01558Q9Y6Z2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC10.97□□□□□ -0.65
LINC01558Q9Y6Z2 PCDHB18P-201ENST00000524813 2368 ntBASIC10.97□□□□□ -0.65
LINC01558Q9Y6Z2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
LINC01558Q9Y6Z2 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC01558Q9Y6Z2 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01558Q9Y6Z2 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01558Q9Y6Z2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01558Q9Y6Z2 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01558Q9Y6Z2 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
LINC01558Q9Y6Z2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01558Q9Y6Z2 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC01558Q9Y6Z2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01558Q9Y6Z2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01558Q9Y6Z2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC01558Q9Y6Z2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
LINC01558Q9Y6Z2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01558Q9Y6Z2 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01558Q9Y6Z2 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
LINC01558Q9Y6Z2 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC10.97□□□□□ -0.65
LINC01558Q9Y6Z2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01558Q9Y6Z2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01558Q9Y6Z2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
LINC01558Q9Y6Z2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01558Q9Y6Z2 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
LINC01558Q9Y6Z2 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
LINC01558Q9Y6Z2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01558Q9Y6Z2 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01558Q9Y6Z2 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01558Q9Y6Z2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01558Q9Y6Z2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC10.96□□□□□ -0.65
LINC01558Q9Y6Z2 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01558Q9Y6Z2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01558Q9Y6Z2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC10.96□□□□□ -0.65
LINC01558Q9Y6Z2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01558Q9Y6Z2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC01558Q9Y6Z2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01558Q9Y6Z2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01558Q9Y6Z2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC10.96□□□□□ -0.65
LINC01558Q9Y6Z2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC10.96□□□□□ -0.65
LINC01558Q9Y6Z2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01558Q9Y6Z2 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01558Q9Y6Z2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC10.96□□□□□ -0.65
LINC01558Q9Y6Z2 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01558Q9Y6Z2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01558Q9Y6Z2 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01558Q9Y6Z2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
LINC01558Q9Y6Z2 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01558Q9Y6Z2 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01558Q9Y6Z2 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01558Q9Y6Z2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
LINC01558Q9Y6Z2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
LINC01558Q9Y6Z2 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms