Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.65■□□□□ 0.9
NLGN3Q9NZ94 AL117328.2-201ENST00000624617 1940 ntBASIC20.65■□□□□ 0.9
NLGN3Q9NZ94 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NLGN3Q9NZ94 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NLGN3Q9NZ94 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NLGN3Q9NZ94 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.65■□□□□ 0.9
NLGN3Q9NZ94 MIPEPP3-201ENST00000412105 444 ntBASIC20.65■□□□□ 0.9
NLGN3Q9NZ94 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NLGN3Q9NZ94 AL512625.2-201ENST00000417533 625 ntBASIC20.65■□□□□ 0.9
NLGN3Q9NZ94 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NLGN3Q9NZ94 FAM201B-201ENST00000458407 597 ntBASIC20.65■□□□□ 0.9
NLGN3Q9NZ94 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.65■□□□□ 0.9
NLGN3Q9NZ94 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
NLGN3Q9NZ94 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.65■□□□□ 0.9
NLGN3Q9NZ94 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.65■□□□□ 0.9
NLGN3Q9NZ94 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NLGN3Q9NZ94 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.65■□□□□ 0.9
NLGN3Q9NZ94 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.65■□□□□ 0.9
NLGN3Q9NZ94 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NLGN3Q9NZ94 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.64■□□□□ 0.9
NLGN3Q9NZ94 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.64■□□□□ 0.9
NLGN3Q9NZ94 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.64■□□□□ 0.89
NLGN3Q9NZ94 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.64■□□□□ 0.89
NLGN3Q9NZ94 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NLGN3Q9NZ94 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
NLGN3Q9NZ94 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NLGN3Q9NZ94 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.64■□□□□ 0.89
NLGN3Q9NZ94 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NLGN3Q9NZ94 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NLGN3Q9NZ94 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NLGN3Q9NZ94 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.64■□□□□ 0.89
NLGN3Q9NZ94 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.64■□□□□ 0.89
NLGN3Q9NZ94 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.64■□□□□ 0.89
NLGN3Q9NZ94 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
NLGN3Q9NZ94 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.64■□□□□ 0.89
NLGN3Q9NZ94 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NLGN3Q9NZ94 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
NLGN3Q9NZ94 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NLGN3Q9NZ94 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.63■□□□□ 0.89
NLGN3Q9NZ94 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NLGN3Q9NZ94 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.63■□□□□ 0.89
NLGN3Q9NZ94 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.63■□□□□ 0.89
NLGN3Q9NZ94 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.63■□□□□ 0.89
NLGN3Q9NZ94 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
NLGN3Q9NZ94 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.63■□□□□ 0.89
NLGN3Q9NZ94 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.63■□□□□ 0.89
NLGN3Q9NZ94 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.63■□□□□ 0.89
NLGN3Q9NZ94 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.63■□□□□ 0.89
NLGN3Q9NZ94 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NLGN3Q9NZ94 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NLGN3Q9NZ94 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.63■□□□□ 0.89
NLGN3Q9NZ94 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NLGN3Q9NZ94 KRT16P2-201ENST00000414673 1423 ntBASIC20.62■□□□□ 0.89
NLGN3Q9NZ94 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NLGN3Q9NZ94 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NLGN3Q9NZ94 AC233723.2-201ENST00000623798 2106 ntBASIC20.62■□□□□ 0.89
NLGN3Q9NZ94 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NLGN3Q9NZ94 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NLGN3Q9NZ94 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NLGN3Q9NZ94 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.62■□□□□ 0.89
NLGN3Q9NZ94 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
NLGN3Q9NZ94 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.62■□□□□ 0.89
NLGN3Q9NZ94 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NLGN3Q9NZ94 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NLGN3Q9NZ94 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.62■□□□□ 0.89
NLGN3Q9NZ94 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NLGN3Q9NZ94 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NLGN3Q9NZ94 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NLGN3Q9NZ94 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.61■□□□□ 0.89
NLGN3Q9NZ94 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NLGN3Q9NZ94 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NLGN3Q9NZ94 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
NLGN3Q9NZ94 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NLGN3Q9NZ94 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
NLGN3Q9NZ94 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NLGN3Q9NZ94 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NLGN3Q9NZ94 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.61■□□□□ 0.89
NLGN3Q9NZ94 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.61■□□□□ 0.89
NLGN3Q9NZ94 AC016405.3-201ENST00000607710 860 ntBASIC20.61■□□□□ 0.89
NLGN3Q9NZ94 AC092118.2-201ENST00000613495 667 ntBASIC20.61■□□□□ 0.89
NLGN3Q9NZ94 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
NLGN3Q9NZ94 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.61■□□□□ 0.89
NLGN3Q9NZ94 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NLGN3Q9NZ94 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NLGN3Q9NZ94 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NLGN3Q9NZ94 AC139530.1-201ENST00000575312 1977 ntBASIC20.61■□□□□ 0.89
NLGN3Q9NZ94 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.61■□□□□ 0.89
NLGN3Q9NZ94 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NLGN3Q9NZ94 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NLGN3Q9NZ94 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NLGN3Q9NZ94 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NLGN3Q9NZ94 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NLGN3Q9NZ94 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NLGN3Q9NZ94 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NLGN3Q9NZ94 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
NLGN3Q9NZ94 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.6■□□□□ 0.89
NLGN3Q9NZ94 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NLGN3Q9NZ94 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
NLGN3Q9NZ94 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
NLGN3Q9NZ94 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms