Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.47■□□□□ 0.39
LIN7CQ9NUP9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.47■□□□□ 0.39
LIN7CQ9NUP9 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LIN7CQ9NUP9 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
LIN7CQ9NUP9 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LIN7CQ9NUP9 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
LIN7CQ9NUP9 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LIN7CQ9NUP9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LIN7CQ9NUP9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.47■□□□□ 0.39
LIN7CQ9NUP9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LIN7CQ9NUP9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.46■□□□□ 0.39
LIN7CQ9NUP9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LIN7CQ9NUP9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
LIN7CQ9NUP9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LIN7CQ9NUP9 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LIN7CQ9NUP9 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LIN7CQ9NUP9 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.46■□□□□ 0.39
LIN7CQ9NUP9 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.46■□□□□ 0.39
LIN7CQ9NUP9 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.46■□□□□ 0.39
LIN7CQ9NUP9 RASA4CP-201ENST00000424092 1398 ntBASIC17.46■□□□□ 0.39
LIN7CQ9NUP9 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LIN7CQ9NUP9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LIN7CQ9NUP9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.46■□□□□ 0.39
LIN7CQ9NUP9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.46■□□□□ 0.39
LIN7CQ9NUP9 AC008764.7-201ENST00000593779 1081 ntBASIC17.46■□□□□ 0.39
LIN7CQ9NUP9 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LIN7CQ9NUP9 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.46■□□□□ 0.39
LIN7CQ9NUP9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LIN7CQ9NUP9 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.46■□□□□ 0.39
LIN7CQ9NUP9 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
LIN7CQ9NUP9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LIN7CQ9NUP9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.46■□□□□ 0.39
LIN7CQ9NUP9 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.46■□□□□ 0.39
LIN7CQ9NUP9 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LIN7CQ9NUP9 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.45■□□□□ 0.38
LIN7CQ9NUP9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LIN7CQ9NUP9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LIN7CQ9NUP9 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LIN7CQ9NUP9 AC099791.1-201ENST00000416440 715 ntBASIC17.45■□□□□ 0.38
LIN7CQ9NUP9 AC010141.3-201ENST00000456659 717 ntBASIC17.45■□□□□ 0.38
LIN7CQ9NUP9 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
LIN7CQ9NUP9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LIN7CQ9NUP9 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LIN7CQ9NUP9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LIN7CQ9NUP9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.45■□□□□ 0.38
LIN7CQ9NUP9 SLC25A24-204ENST00000569674 2357 ntBASIC17.45■□□□□ 0.38
LIN7CQ9NUP9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.45■□□□□ 0.38
LIN7CQ9NUP9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LIN7CQ9NUP9 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.44■□□□□ 0.38
LIN7CQ9NUP9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LIN7CQ9NUP9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
LIN7CQ9NUP9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.44■□□□□ 0.38
LIN7CQ9NUP9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LIN7CQ9NUP9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LIN7CQ9NUP9 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LIN7CQ9NUP9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LIN7CQ9NUP9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LIN7CQ9NUP9 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LIN7CQ9NUP9 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
LIN7CQ9NUP9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
LIN7CQ9NUP9 AP005435.1-201ENST00000529293 1178 ntBASIC17.44■□□□□ 0.38
LIN7CQ9NUP9 AC126544.1-201ENST00000580842 1059 ntBASIC17.44■□□□□ 0.38
LIN7CQ9NUP9 AC010525.1-201ENST00000585559 441 ntBASIC17.44■□□□□ 0.38
LIN7CQ9NUP9 AL136967.2-201ENST00000623968 743 ntBASIC17.44■□□□□ 0.38
LIN7CQ9NUP9 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
LIN7CQ9NUP9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LIN7CQ9NUP9 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LIN7CQ9NUP9 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LIN7CQ9NUP9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LIN7CQ9NUP9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LIN7CQ9NUP9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LIN7CQ9NUP9 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LIN7CQ9NUP9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
LIN7CQ9NUP9 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.44■□□□□ 0.38
LIN7CQ9NUP9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
LIN7CQ9NUP9 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LIN7CQ9NUP9 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LIN7CQ9NUP9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
LIN7CQ9NUP9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LIN7CQ9NUP9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LIN7CQ9NUP9 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LIN7CQ9NUP9 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LIN7CQ9NUP9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LIN7CQ9NUP9 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LIN7CQ9NUP9 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LIN7CQ9NUP9 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.43■□□□□ 0.38
LIN7CQ9NUP9 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.43■□□□□ 0.38
LIN7CQ9NUP9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.43■□□□□ 0.38
LIN7CQ9NUP9 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.43■□□□□ 0.38
LIN7CQ9NUP9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LIN7CQ9NUP9 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LIN7CQ9NUP9 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LIN7CQ9NUP9 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LIN7CQ9NUP9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LIN7CQ9NUP9 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
LIN7CQ9NUP9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LIN7CQ9NUP9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LIN7CQ9NUP9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LIN7CQ9NUP9 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LIN7CQ9NUP9 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms