Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB16Q9NRJ7 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB16Q9NRJ7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB16Q9NRJ7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB16Q9NRJ7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHB16Q9NRJ7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB16Q9NRJ7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB16Q9NRJ7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB16Q9NRJ7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB16Q9NRJ7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB16Q9NRJ7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB16Q9NRJ7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
PCDHB16Q9NRJ7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB16Q9NRJ7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.21■□□□□ 0.51
PCDHB16Q9NRJ7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHB16Q9NRJ7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PCDHB16Q9NRJ7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB16Q9NRJ7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
PCDHB16Q9NRJ7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHB16Q9NRJ7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHB16Q9NRJ7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
PCDHB16Q9NRJ7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PCDHB16Q9NRJ7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PCDHB16Q9NRJ7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB16Q9NRJ7 SYT6-210ENST00000641643 1587 ntBASIC18.21■□□□□ 0.51
PCDHB16Q9NRJ7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHB16Q9NRJ7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.21■□□□□ 0.5
PCDHB16Q9NRJ7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
PCDHB16Q9NRJ7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB16Q9NRJ7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHB16Q9NRJ7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB16Q9NRJ7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB16Q9NRJ7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHB16Q9NRJ7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB16Q9NRJ7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB16Q9NRJ7 AP005435.1-201ENST00000529293 1178 ntBASIC18.2■□□□□ 0.5
PCDHB16Q9NRJ7 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.2■□□□□ 0.5
PCDHB16Q9NRJ7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHB16Q9NRJ7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB16Q9NRJ7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB16Q9NRJ7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB16Q9NRJ7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB16Q9NRJ7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB16Q9NRJ7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB16Q9NRJ7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHB16Q9NRJ7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHB16Q9NRJ7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHB16Q9NRJ7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB16Q9NRJ7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHB16Q9NRJ7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHB16Q9NRJ7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB16Q9NRJ7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB16Q9NRJ7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PCDHB16Q9NRJ7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
PCDHB16Q9NRJ7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHB16Q9NRJ7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHB16Q9NRJ7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB16Q9NRJ7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB16Q9NRJ7 AC131212.1-201ENST00000613771 668 ntBASIC18.19■□□□□ 0.5
PCDHB16Q9NRJ7 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHB16Q9NRJ7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHB16Q9NRJ7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB16Q9NRJ7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB16Q9NRJ7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB16Q9NRJ7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB16Q9NRJ7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB16Q9NRJ7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB16Q9NRJ7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHB16Q9NRJ7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB16Q9NRJ7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB16Q9NRJ7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHB16Q9NRJ7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHB16Q9NRJ7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB16Q9NRJ7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB16Q9NRJ7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
PCDHB16Q9NRJ7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB16Q9NRJ7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
PCDHB16Q9NRJ7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB16Q9NRJ7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB16Q9NRJ7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB16Q9NRJ7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB16Q9NRJ7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB16Q9NRJ7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHB16Q9NRJ7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB16Q9NRJ7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB16Q9NRJ7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PCDHB16Q9NRJ7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB16Q9NRJ7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB16Q9NRJ7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB16Q9NRJ7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHB16Q9NRJ7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHB16Q9NRJ7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB16Q9NRJ7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB16Q9NRJ7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB16Q9NRJ7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PCDHB16Q9NRJ7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB16Q9NRJ7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB16Q9NRJ7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB16Q9NRJ7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PCDHB16Q9NRJ7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms