Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHD8Q9HCK8 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHD8Q9HCK8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.93■□□□□ 0.78
CHD8Q9HCK8 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.93■□□□□ 0.78
CHD8Q9HCK8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHD8Q9HCK8 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.93■□□□□ 0.78
CHD8Q9HCK8 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHD8Q9HCK8 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.93■□□□□ 0.78
CHD8Q9HCK8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CHD8Q9HCK8 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.93■□□□□ 0.78
CHD8Q9HCK8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
CHD8Q9HCK8 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
CHD8Q9HCK8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CHD8Q9HCK8 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHD8Q9HCK8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHD8Q9HCK8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHD8Q9HCK8 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHD8Q9HCK8 AC026396.1-201ENST00000419388 421 ntBASIC19.92■□□□□ 0.78
CHD8Q9HCK8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CHD8Q9HCK8 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHD8Q9HCK8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHD8Q9HCK8 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHD8Q9HCK8 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
CHD8Q9HCK8 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHD8Q9HCK8 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHD8Q9HCK8 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.92■□□□□ 0.78
CHD8Q9HCK8 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.92■□□□□ 0.78
CHD8Q9HCK8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHD8Q9HCK8 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CHD8Q9HCK8 LINC00543-201ENST00000567234 1845 ntBASIC19.92■□□□□ 0.78
CHD8Q9HCK8 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHD8Q9HCK8 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHD8Q9HCK8 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHD8Q9HCK8 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.91■□□□□ 0.78
CHD8Q9HCK8 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.91■□□□□ 0.78
CHD8Q9HCK8 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CHD8Q9HCK8 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.91■□□□□ 0.78
CHD8Q9HCK8 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHD8Q9HCK8 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.91■□□□□ 0.78
CHD8Q9HCK8 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHD8Q9HCK8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHD8Q9HCK8 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.91■□□□□ 0.78
CHD8Q9HCK8 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHD8Q9HCK8 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.91■□□□□ 0.78
CHD8Q9HCK8 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHD8Q9HCK8 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CHD8Q9HCK8 KRT18P56-201ENST00000507275 550 ntBASIC19.9■□□□□ 0.78
CHD8Q9HCK8 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHD8Q9HCK8 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.9■□□□□ 0.78
CHD8Q9HCK8 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.9■□□□□ 0.78
CHD8Q9HCK8 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CHD8Q9HCK8 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.9■□□□□ 0.78
CHD8Q9HCK8 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CHD8Q9HCK8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.9■□□□□ 0.78
CHD8Q9HCK8 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CHD8Q9HCK8 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHD8Q9HCK8 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHD8Q9HCK8 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHD8Q9HCK8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHD8Q9HCK8 CRYGFP-201ENST00000418459 633 ntBASIC19.9■□□□□ 0.78
CHD8Q9HCK8 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.9■□□□□ 0.78
CHD8Q9HCK8 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.9■□□□□ 0.78
CHD8Q9HCK8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHD8Q9HCK8 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CHD8Q9HCK8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.9■□□□□ 0.78
CHD8Q9HCK8 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHD8Q9HCK8 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.9■□□□□ 0.78
CHD8Q9HCK8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.9■□□□□ 0.78
CHD8Q9HCK8 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CHD8Q9HCK8 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CHD8Q9HCK8 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHD8Q9HCK8 KRT8P9-201ENST00000558927 1449 ntBASIC19.89■□□□□ 0.77
CHD8Q9HCK8 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHD8Q9HCK8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHD8Q9HCK8 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.89■□□□□ 0.77
CHD8Q9HCK8 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.89■□□□□ 0.77
CHD8Q9HCK8 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.89■□□□□ 0.77
CHD8Q9HCK8 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.89■□□□□ 0.77
CHD8Q9HCK8 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CHD8Q9HCK8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CHD8Q9HCK8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CHD8Q9HCK8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHD8Q9HCK8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHD8Q9HCK8 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHD8Q9HCK8 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHD8Q9HCK8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.89■□□□□ 0.77
CHD8Q9HCK8 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.89■□□□□ 0.77
CHD8Q9HCK8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHD8Q9HCK8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.88■□□□□ 0.77
CHD8Q9HCK8 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHD8Q9HCK8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHD8Q9HCK8 AC079630.1-202ENST00000618127 1840 ntBASIC19.88■□□□□ 0.77
CHD8Q9HCK8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.88■□□□□ 0.77
CHD8Q9HCK8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.88■□□□□ 0.77
CHD8Q9HCK8 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
CHD8Q9HCK8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.88■□□□□ 0.77
CHD8Q9HCK8 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.88■□□□□ 0.77
CHD8Q9HCK8 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CHD8Q9HCK8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHD8Q9HCK8 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms