Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRTM1Q9HBL6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.25■□□□□ 0.83
LRTM1Q9HBL6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.25■□□□□ 0.83
LRTM1Q9HBL6 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.25■□□□□ 0.83
LRTM1Q9HBL6 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.25■□□□□ 0.83
LRTM1Q9HBL6 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
LRTM1Q9HBL6 AC009237.3-201ENST00000393279 1427 ntBASIC20.25■□□□□ 0.83
LRTM1Q9HBL6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRTM1Q9HBL6 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.25■□□□□ 0.83
LRTM1Q9HBL6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRTM1Q9HBL6 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRTM1Q9HBL6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRTM1Q9HBL6 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRTM1Q9HBL6 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRTM1Q9HBL6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.24■□□□□ 0.83
LRTM1Q9HBL6 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
LRTM1Q9HBL6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRTM1Q9HBL6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRTM1Q9HBL6 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.24■□□□□ 0.83
LRTM1Q9HBL6 AC099791.1-201ENST00000416440 715 ntBASIC20.24■□□□□ 0.83
LRTM1Q9HBL6 AC096631.2-201ENST00000436136 790 ntBASIC20.24■□□□□ 0.83
LRTM1Q9HBL6 PBX2P1-201ENST00000493219 1291 ntBASIC20.24■□□□□ 0.83
LRTM1Q9HBL6 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.24■□□□□ 0.83
LRTM1Q9HBL6 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.24■□□□□ 0.83
LRTM1Q9HBL6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.24■□□□□ 0.83
LRTM1Q9HBL6 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.24■□□□□ 0.83
LRTM1Q9HBL6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
LRTM1Q9HBL6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRTM1Q9HBL6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRTM1Q9HBL6 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRTM1Q9HBL6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRTM1Q9HBL6 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.24■□□□□ 0.83
LRTM1Q9HBL6 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.24■□□□□ 0.83
LRTM1Q9HBL6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRTM1Q9HBL6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.23■□□□□ 0.83
LRTM1Q9HBL6 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.23■□□□□ 0.83
LRTM1Q9HBL6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.23■□□□□ 0.83
LRTM1Q9HBL6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRTM1Q9HBL6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRTM1Q9HBL6 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRTM1Q9HBL6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRTM1Q9HBL6 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRTM1Q9HBL6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.23■□□□□ 0.83
LRTM1Q9HBL6 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.23■□□□□ 0.83
LRTM1Q9HBL6 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.23■□□□□ 0.83
LRTM1Q9HBL6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.23■□□□□ 0.83
LRTM1Q9HBL6 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRTM1Q9HBL6 AC027682.1-201ENST00000562846 899 ntBASIC20.23■□□□□ 0.83
LRTM1Q9HBL6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.23■□□□□ 0.83
LRTM1Q9HBL6 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRTM1Q9HBL6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.23■□□□□ 0.83
LRTM1Q9HBL6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRTM1Q9HBL6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRTM1Q9HBL6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRTM1Q9HBL6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRTM1Q9HBL6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRTM1Q9HBL6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRTM1Q9HBL6 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
LRTM1Q9HBL6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
LRTM1Q9HBL6 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
LRTM1Q9HBL6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.22■□□□□ 0.83
LRTM1Q9HBL6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.22■□□□□ 0.83
LRTM1Q9HBL6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.22■□□□□ 0.83
LRTM1Q9HBL6 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.22■□□□□ 0.83
LRTM1Q9HBL6 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.22■□□□□ 0.83
LRTM1Q9HBL6 AC105233.4-201ENST00000642045 216 ntBASIC20.22■□□□□ 0.83
LRTM1Q9HBL6 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRTM1Q9HBL6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.22■□□□□ 0.83
LRTM1Q9HBL6 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRTM1Q9HBL6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRTM1Q9HBL6 TSPY26P-201ENST00000476365 1326 ntBASIC20.22■□□□□ 0.83
LRTM1Q9HBL6 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.22■□□□□ 0.83
LRTM1Q9HBL6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRTM1Q9HBL6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRTM1Q9HBL6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LRTM1Q9HBL6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.21■□□□□ 0.83
LRTM1Q9HBL6 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
LRTM1Q9HBL6 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRTM1Q9HBL6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.21■□□□□ 0.83
LRTM1Q9HBL6 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRTM1Q9HBL6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRTM1Q9HBL6 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRTM1Q9HBL6 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.21■□□□□ 0.83
LRTM1Q9HBL6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRTM1Q9HBL6 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.21■□□□□ 0.83
LRTM1Q9HBL6 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.21■□□□□ 0.83
LRTM1Q9HBL6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRTM1Q9HBL6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
LRTM1Q9HBL6 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRTM1Q9HBL6 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
LRTM1Q9HBL6 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRTM1Q9HBL6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LRTM1Q9HBL6 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
LRTM1Q9HBL6 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRTM1Q9HBL6 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.2■□□□□ 0.82
LRTM1Q9HBL6 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.2■□□□□ 0.82
LRTM1Q9HBL6 AC106739.1-201ENST00000617035 715 ntBASIC20.2■□□□□ 0.82
LRTM1Q9HBL6 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.2■□□□□ 0.82
LRTM1Q9HBL6 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LRTM1Q9HBL6 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms