Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPPED1Q9BRF8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPPED1Q9BRF8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CPPED1Q9BRF8 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CPPED1Q9BRF8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CPPED1Q9BRF8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
CPPED1Q9BRF8 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.82■□□□□ 0.76
CPPED1Q9BRF8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CPPED1Q9BRF8 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.82■□□□□ 0.76
CPPED1Q9BRF8 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.82■□□□□ 0.76
CPPED1Q9BRF8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPPED1Q9BRF8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.82■□□□□ 0.76
CPPED1Q9BRF8 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.82■□□□□ 0.76
CPPED1Q9BRF8 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.82■□□□□ 0.76
CPPED1Q9BRF8 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPPED1Q9BRF8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.82■□□□□ 0.76
CPPED1Q9BRF8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPPED1Q9BRF8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.82■□□□□ 0.76
CPPED1Q9BRF8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CPPED1Q9BRF8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPPED1Q9BRF8 PLK5-205ENST00000642079 1969 ntBASIC19.81■□□□□ 0.76
CPPED1Q9BRF8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CPPED1Q9BRF8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPPED1Q9BRF8 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.81■□□□□ 0.76
CPPED1Q9BRF8 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPPED1Q9BRF8 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.81■□□□□ 0.76
CPPED1Q9BRF8 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CPPED1Q9BRF8 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPPED1Q9BRF8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CPPED1Q9BRF8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CPPED1Q9BRF8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPPED1Q9BRF8 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CPPED1Q9BRF8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CPPED1Q9BRF8 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPPED1Q9BRF8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPPED1Q9BRF8 AC092667.1-201ENST00000434301 2586 ntBASIC19.81■□□□□ 0.76
CPPED1Q9BRF8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPPED1Q9BRF8 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPPED1Q9BRF8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.8■□□□□ 0.76
CPPED1Q9BRF8 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CPPED1Q9BRF8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPPED1Q9BRF8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPPED1Q9BRF8 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPPED1Q9BRF8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CPPED1Q9BRF8 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
CPPED1Q9BRF8 AC131281.2-201ENST00000520478 145 ntBASIC19.8■□□□□ 0.76
CPPED1Q9BRF8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.8■□□□□ 0.76
CPPED1Q9BRF8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CPPED1Q9BRF8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPPED1Q9BRF8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPPED1Q9BRF8 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CPPED1Q9BRF8 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.8■□□□□ 0.76
CPPED1Q9BRF8 GABARAPL3-202ENST00000624044 1851 ntBASIC19.79■□□□□ 0.76
CPPED1Q9BRF8 AP005212.1-201ENST00000581547 1997 ntBASIC19.79■□□□□ 0.76
CPPED1Q9BRF8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CPPED1Q9BRF8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPPED1Q9BRF8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CPPED1Q9BRF8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPPED1Q9BRF8 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPPED1Q9BRF8 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPPED1Q9BRF8 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CPPED1Q9BRF8 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.79■□□□□ 0.76
CPPED1Q9BRF8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.79■□□□□ 0.76
CPPED1Q9BRF8 AC133561.4-201ENST00000566112 224 ntBASIC19.79■□□□□ 0.76
CPPED1Q9BRF8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CPPED1Q9BRF8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPPED1Q9BRF8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPPED1Q9BRF8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPPED1Q9BRF8 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPPED1Q9BRF8 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPPED1Q9BRF8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPPED1Q9BRF8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CPPED1Q9BRF8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPPED1Q9BRF8 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPPED1Q9BRF8 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPPED1Q9BRF8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CPPED1Q9BRF8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CPPED1Q9BRF8 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.78■□□□□ 0.76
CPPED1Q9BRF8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPPED1Q9BRF8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPPED1Q9BRF8 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CPPED1Q9BRF8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CPPED1Q9BRF8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.78■□□□□ 0.76
CPPED1Q9BRF8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.78■□□□□ 0.76
CPPED1Q9BRF8 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPPED1Q9BRF8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPPED1Q9BRF8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.78■□□□□ 0.76
CPPED1Q9BRF8 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
CPPED1Q9BRF8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPPED1Q9BRF8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CPPED1Q9BRF8 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPPED1Q9BRF8 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CPPED1Q9BRF8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPPED1Q9BRF8 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CPPED1Q9BRF8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.77■□□□□ 0.76
CPPED1Q9BRF8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CPPED1Q9BRF8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.77■□□□□ 0.76
CPPED1Q9BRF8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.77■□□□□ 0.76
CPPED1Q9BRF8 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CPPED1Q9BRF8 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms