Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TUBA1CQ9BQE3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
TUBA1CQ9BQE3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TUBA1CQ9BQE3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TUBA1CQ9BQE3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.81■□□□□ 0.76
TUBA1CQ9BQE3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.81■□□□□ 0.76
TUBA1CQ9BQE3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
TUBA1CQ9BQE3 IGHV3-19-201ENST00000521488 291 ntBASIC19.81■□□□□ 0.76
TUBA1CQ9BQE3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.81■□□□□ 0.76
TUBA1CQ9BQE3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.81■□□□□ 0.76
TUBA1CQ9BQE3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.81■□□□□ 0.76
TUBA1CQ9BQE3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
TUBA1CQ9BQE3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TUBA1CQ9BQE3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TUBA1CQ9BQE3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.81■□□□□ 0.76
TUBA1CQ9BQE3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.81■□□□□ 0.76
TUBA1CQ9BQE3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
TUBA1CQ9BQE3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TUBA1CQ9BQE3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.81■□□□□ 0.76
TUBA1CQ9BQE3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TUBA1CQ9BQE3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TUBA1CQ9BQE3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.8■□□□□ 0.76
TUBA1CQ9BQE3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TUBA1CQ9BQE3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TUBA1CQ9BQE3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TUBA1CQ9BQE3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TUBA1CQ9BQE3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TUBA1CQ9BQE3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TUBA1CQ9BQE3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.8■□□□□ 0.76
TUBA1CQ9BQE3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TUBA1CQ9BQE3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TUBA1CQ9BQE3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TUBA1CQ9BQE3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.8■□□□□ 0.76
TUBA1CQ9BQE3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.8■□□□□ 0.76
TUBA1CQ9BQE3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.8■□□□□ 0.76
TUBA1CQ9BQE3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TUBA1CQ9BQE3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TUBA1CQ9BQE3 AC004687.1-201ENST00000579003 1625 ntBASIC19.8■□□□□ 0.76
TUBA1CQ9BQE3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.79■□□□□ 0.76
TUBA1CQ9BQE3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.79■□□□□ 0.76
TUBA1CQ9BQE3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.79■□□□□ 0.76
TUBA1CQ9BQE3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA1CQ9BQE3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA1CQ9BQE3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TUBA1CQ9BQE3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.79■□□□□ 0.76
TUBA1CQ9BQE3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA1CQ9BQE3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.79■□□□□ 0.76
TUBA1CQ9BQE3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TUBA1CQ9BQE3 AF106564.1-201ENST00000607058 2553 ntBASIC19.79■□□□□ 0.76
TUBA1CQ9BQE3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TUBA1CQ9BQE3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.79■□□□□ 0.76
TUBA1CQ9BQE3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.79■□□□□ 0.76
TUBA1CQ9BQE3 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.79■□□□□ 0.76
TUBA1CQ9BQE3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA1CQ9BQE3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA1CQ9BQE3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.79■□□□□ 0.76
TUBA1CQ9BQE3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.79■□□□□ 0.76
TUBA1CQ9BQE3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBA1CQ9BQE3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBA1CQ9BQE3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBA1CQ9BQE3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBA1CQ9BQE3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBA1CQ9BQE3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBA1CQ9BQE3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
TUBA1CQ9BQE3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.78■□□□□ 0.76
TUBA1CQ9BQE3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBA1CQ9BQE3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.78■□□□□ 0.76
TUBA1CQ9BQE3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.78■□□□□ 0.76
TUBA1CQ9BQE3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TUBA1CQ9BQE3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBA1CQ9BQE3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBA1CQ9BQE3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBA1CQ9BQE3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBA1CQ9BQE3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
TUBA1CQ9BQE3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
TUBA1CQ9BQE3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.78■□□□□ 0.76
TUBA1CQ9BQE3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TUBA1CQ9BQE3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.78■□□□□ 0.76
TUBA1CQ9BQE3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.77■□□□□ 0.76
TUBA1CQ9BQE3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TUBA1CQ9BQE3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TUBA1CQ9BQE3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
TUBA1CQ9BQE3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TUBA1CQ9BQE3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.76
TUBA1CQ9BQE3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TUBA1CQ9BQE3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.77■□□□□ 0.76
TUBA1CQ9BQE3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.77■□□□□ 0.76
TUBA1CQ9BQE3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.77■□□□□ 0.76
TUBA1CQ9BQE3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TUBA1CQ9BQE3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.77■□□□□ 0.75
TUBA1CQ9BQE3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.76■□□□□ 0.75
TUBA1CQ9BQE3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.76■□□□□ 0.75
TUBA1CQ9BQE3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TUBA1CQ9BQE3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBA1CQ9BQE3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBA1CQ9BQE3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TUBA1CQ9BQE3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TUBA1CQ9BQE3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TUBA1CQ9BQE3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBA1CQ9BQE3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms