Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TTC9Q92623 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.05■□□□□ 0.8
TTC9Q92623 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TTC9Q92623 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TTC9Q92623 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.05■□□□□ 0.8
TTC9Q92623 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TTC9Q92623 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.05■□□□□ 0.8
TTC9Q92623 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.05■□□□□ 0.8
TTC9Q92623 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TTC9Q92623 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TTC9Q92623 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TTC9Q92623 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
TTC9Q92623 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TTC9Q92623 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.04■□□□□ 0.8
TTC9Q92623 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TTC9Q92623 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TTC9Q92623 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TTC9Q92623 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TTC9Q92623 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
TTC9Q92623 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TTC9Q92623 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TTC9Q92623 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TTC9Q92623 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TTC9Q92623 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TTC9Q92623 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TTC9Q92623 RPS2P4-201ENST00000476944 856 ntBASIC20.04■□□□□ 0.8
TTC9Q92623 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.04■□□□□ 0.8
TTC9Q92623 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.04■□□□□ 0.8
TTC9Q92623 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TTC9Q92623 AC010536.3-201ENST00000620306 533 ntBASIC20.04■□□□□ 0.8
TTC9Q92623 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TTC9Q92623 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TTC9Q92623 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TTC9Q92623 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.03■□□□□ 0.8
TTC9Q92623 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.03■□□□□ 0.8
TTC9Q92623 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.03■□□□□ 0.8
TTC9Q92623 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TTC9Q92623 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.03■□□□□ 0.8
TTC9Q92623 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TTC9Q92623 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TTC9Q92623 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TTC9Q92623 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TTC9Q92623 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TTC9Q92623 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.02■□□□□ 0.8
TTC9Q92623 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TTC9Q92623 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.02■□□□□ 0.8
TTC9Q92623 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.02■□□□□ 0.8
TTC9Q92623 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TTC9Q92623 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TTC9Q92623 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.02■□□□□ 0.8
TTC9Q92623 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.02■□□□□ 0.8
TTC9Q92623 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TTC9Q92623 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
TTC9Q92623 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
TTC9Q92623 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.79
TTC9Q92623 AC009237.3-201ENST00000393279 1427 ntBASIC20.02■□□□□ 0.79
TTC9Q92623 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TTC9Q92623 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TTC9Q92623 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TTC9Q92623 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TTC9Q92623 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.01■□□□□ 0.79
TTC9Q92623 ESRRAP1-201ENST00000400596 1257 ntBASIC20.01■□□□□ 0.79
TTC9Q92623 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TTC9Q92623 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.01■□□□□ 0.79
TTC9Q92623 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TTC9Q92623 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.01■□□□□ 0.79
TTC9Q92623 MKRN4P-201ENST00000444706 1521 ntBASIC20.01■□□□□ 0.79
TTC9Q92623 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TTC9Q92623 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TTC9Q92623 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20■□□□□ 0.79
TTC9Q92623 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20■□□□□ 0.79
TTC9Q92623 AC087742.1-201ENST00000575880 1738 ntBASIC20■□□□□ 0.79
TTC9Q92623 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TTC9Q92623 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20■□□□□ 0.79
TTC9Q92623 AL158047.1-201ENST00000445918 881 ntBASIC20■□□□□ 0.79
TTC9Q92623 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20■□□□□ 0.79
TTC9Q92623 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20■□□□□ 0.79
TTC9Q92623 AC092118.2-201ENST00000613495 667 ntBASIC20■□□□□ 0.79
TTC9Q92623 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TTC9Q92623 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20■□□□□ 0.79
TTC9Q92623 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TTC9Q92623 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TTC9Q92623 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TTC9Q92623 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20■□□□□ 0.79
TTC9Q92623 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TTC9Q92623 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TTC9Q92623 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TTC9Q92623 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.99■□□□□ 0.79
TTC9Q92623 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TTC9Q92623 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TTC9Q92623 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TTC9Q92623 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.99■□□□□ 0.79
TTC9Q92623 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TTC9Q92623 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TTC9Q92623 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.99■□□□□ 0.79
TTC9Q92623 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.99■□□□□ 0.79
TTC9Q92623 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.99■□□□□ 0.79
TTC9Q92623 AC142381.4-202ENST00000563973 229 ntBASIC19.99■□□□□ 0.79
TTC9Q92623 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TTC9Q92623 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms