Protein–RNA interactions for Protein: Q8N5G0

SMIM20, Small integral membrane protein 20, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20Q8N5G0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
SMIM20Q8N5G0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM20Q8N5G0 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM20Q8N5G0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
SMIM20Q8N5G0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC13.19□□□□□ -0.3
SMIM20Q8N5G0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
SMIM20Q8N5G0 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM20Q8N5G0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC13.19□□□□□ -0.3
SMIM20Q8N5G0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM20Q8N5G0 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM20Q8N5G0 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM20Q8N5G0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM20Q8N5G0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM20Q8N5G0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM20Q8N5G0 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.19□□□□□ -0.3
SMIM20Q8N5G0 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM20Q8N5G0 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM20Q8N5G0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM20Q8N5G0 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM20Q8N5G0 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM20Q8N5G0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM20Q8N5G0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM20Q8N5G0 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SMIM20Q8N5G0 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SMIM20Q8N5G0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC13.19□□□□□ -0.3
SMIM20Q8N5G0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM20Q8N5G0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM20Q8N5G0 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM20Q8N5G0 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM20Q8N5G0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM20Q8N5G0 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM20Q8N5G0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM20Q8N5G0 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM20Q8N5G0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM20Q8N5G0 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SMIM20Q8N5G0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM20Q8N5G0 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SMIM20Q8N5G0 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SMIM20Q8N5G0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM20Q8N5G0 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM20Q8N5G0 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM20Q8N5G0 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM20Q8N5G0 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM20Q8N5G0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM20Q8N5G0 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM20Q8N5G0 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.18□□□□□ -0.3
SMIM20Q8N5G0 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SMIM20Q8N5G0 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SMIM20Q8N5G0 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM20Q8N5G0 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
SMIM20Q8N5G0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM20Q8N5G0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM20Q8N5G0 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM20Q8N5G0 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC13.17□□□□□ -0.3
SMIM20Q8N5G0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
SMIM20Q8N5G0 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM20Q8N5G0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM20Q8N5G0 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM20Q8N5G0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC13.17□□□□□ -0.3
SMIM20Q8N5G0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM20Q8N5G0 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SMIM20Q8N5G0 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM20Q8N5G0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC13.17□□□□□ -0.3
SMIM20Q8N5G0 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SMIM20Q8N5G0 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM20Q8N5G0 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SMIM20Q8N5G0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
SMIM20Q8N5G0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC13.17□□□□□ -0.3
SMIM20Q8N5G0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM20Q8N5G0 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM20Q8N5G0 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SMIM20Q8N5G0 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM20Q8N5G0 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
SMIM20Q8N5G0 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SMIM20Q8N5G0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM20Q8N5G0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM20Q8N5G0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
SMIM20Q8N5G0 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SMIM20Q8N5G0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM20Q8N5G0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC13.16□□□□□ -0.3
SMIM20Q8N5G0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM20Q8N5G0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SMIM20Q8N5G0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM20Q8N5G0 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC13.16□□□□□ -0.3
SMIM20Q8N5G0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC13.16□□□□□ -0.3
SMIM20Q8N5G0 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.16□□□□□ -0.3
SMIM20Q8N5G0 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM20Q8N5G0 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM20Q8N5G0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM20Q8N5G0 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM20Q8N5G0 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM20Q8N5G0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SMIM20Q8N5G0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
SMIM20Q8N5G0 PCDHB18P-201ENST00000524813 2368 ntBASIC13.16□□□□□ -0.3
SMIM20Q8N5G0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC13.16□□□□□ -0.3
SMIM20Q8N5G0 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM20Q8N5G0 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SMIM20Q8N5G0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC13.16□□□□□ -0.3
SMIM20Q8N5G0 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.16□□□□□ -0.3
SMIM20Q8N5G0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms