Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM42Q8IWZ5 GABARAPL3-202ENST00000624044 1851 ntBASIC20.96■□□□□ 0.95
TRIM42Q8IWZ5 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM42Q8IWZ5 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM42Q8IWZ5 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM42Q8IWZ5 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.96■□□□□ 0.95
TRIM42Q8IWZ5 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.96■□□□□ 0.95
TRIM42Q8IWZ5 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM42Q8IWZ5 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM42Q8IWZ5 AC131212.1-201ENST00000613771 668 ntBASIC20.96■□□□□ 0.95
TRIM42Q8IWZ5 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM42Q8IWZ5 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM42Q8IWZ5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM42Q8IWZ5 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM42Q8IWZ5 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TRIM42Q8IWZ5 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.96■□□□□ 0.95
TRIM42Q8IWZ5 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM42Q8IWZ5 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM42Q8IWZ5 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM42Q8IWZ5 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM42Q8IWZ5 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
TRIM42Q8IWZ5 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM42Q8IWZ5 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM42Q8IWZ5 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.95■□□□□ 0.94
TRIM42Q8IWZ5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM42Q8IWZ5 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM42Q8IWZ5 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM42Q8IWZ5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
TRIM42Q8IWZ5 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.95■□□□□ 0.94
TRIM42Q8IWZ5 KRT16P3-201ENST00000439127 1283 ntBASIC20.95■□□□□ 0.94
TRIM42Q8IWZ5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.95■□□□□ 0.94
TRIM42Q8IWZ5 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.95■□□□□ 0.94
TRIM42Q8IWZ5 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.95■□□□□ 0.94
TRIM42Q8IWZ5 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.95■□□□□ 0.94
TRIM42Q8IWZ5 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.95■□□□□ 0.94
TRIM42Q8IWZ5 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.95■□□□□ 0.94
TRIM42Q8IWZ5 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.95■□□□□ 0.94
TRIM42Q8IWZ5 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.95■□□□□ 0.94
TRIM42Q8IWZ5 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM42Q8IWZ5 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
TRIM42Q8IWZ5 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM42Q8IWZ5 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM42Q8IWZ5 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.95■□□□□ 0.94
TRIM42Q8IWZ5 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TRIM42Q8IWZ5 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM42Q8IWZ5 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM42Q8IWZ5 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM42Q8IWZ5 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM42Q8IWZ5 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM42Q8IWZ5 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM42Q8IWZ5 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
TRIM42Q8IWZ5 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM42Q8IWZ5 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM42Q8IWZ5 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.94■□□□□ 0.94
TRIM42Q8IWZ5 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM42Q8IWZ5 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.94■□□□□ 0.94
TRIM42Q8IWZ5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM42Q8IWZ5 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM42Q8IWZ5 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM42Q8IWZ5 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM42Q8IWZ5 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM42Q8IWZ5 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM42Q8IWZ5 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM42Q8IWZ5 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.93■□□□□ 0.94
TRIM42Q8IWZ5 AL117332.1-201ENST00000622628 974 ntBASIC20.93■□□□□ 0.94
TRIM42Q8IWZ5 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM42Q8IWZ5 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM42Q8IWZ5 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM42Q8IWZ5 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM42Q8IWZ5 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
TRIM42Q8IWZ5 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM42Q8IWZ5 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM42Q8IWZ5 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM42Q8IWZ5 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
TRIM42Q8IWZ5 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM42Q8IWZ5 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TRIM42Q8IWZ5 AC010997.5-201ENST00000609182 354 ntBASIC20.92■□□□□ 0.94
TRIM42Q8IWZ5 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM42Q8IWZ5 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.92■□□□□ 0.94
TRIM42Q8IWZ5 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM42Q8IWZ5 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
TRIM42Q8IWZ5 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.92■□□□□ 0.94
TRIM42Q8IWZ5 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM42Q8IWZ5 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM42Q8IWZ5 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM42Q8IWZ5 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM42Q8IWZ5 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM42Q8IWZ5 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM42Q8IWZ5 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TRIM42Q8IWZ5 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM42Q8IWZ5 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM42Q8IWZ5 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TRIM42Q8IWZ5 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.91■□□□□ 0.94
TRIM42Q8IWZ5 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM42Q8IWZ5 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM42Q8IWZ5 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM42Q8IWZ5 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM42Q8IWZ5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.91■□□□□ 0.94
TRIM42Q8IWZ5 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.9■□□□□ 0.94
TRIM42Q8IWZ5 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms