Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHFQ7M4L6 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHFQ7M4L6 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.99■□□□□ 0.63
SHFQ7M4L6 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SHFQ7M4L6 OXCT2P1-201ENST00000447263 1535 ntBASIC18.99■□□□□ 0.63
SHFQ7M4L6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SHFQ7M4L6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHFQ7M4L6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SHFQ7M4L6 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.99■□□□□ 0.63
SHFQ7M4L6 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHFQ7M4L6 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHFQ7M4L6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHFQ7M4L6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.98■□□□□ 0.63
SHFQ7M4L6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHFQ7M4L6 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHFQ7M4L6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHFQ7M4L6 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.98■□□□□ 0.63
SHFQ7M4L6 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.98■□□□□ 0.63
SHFQ7M4L6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHFQ7M4L6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHFQ7M4L6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHFQ7M4L6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHFQ7M4L6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHFQ7M4L6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SHFQ7M4L6 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHFQ7M4L6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.97■□□□□ 0.63
SHFQ7M4L6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHFQ7M4L6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.97■□□□□ 0.63
SHFQ7M4L6 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SHFQ7M4L6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SHFQ7M4L6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.97■□□□□ 0.63
SHFQ7M4L6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SHFQ7M4L6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SHFQ7M4L6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SHFQ7M4L6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SHFQ7M4L6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SHFQ7M4L6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.97■□□□□ 0.63
SHFQ7M4L6 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SHFQ7M4L6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SHFQ7M4L6 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHFQ7M4L6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
SHFQ7M4L6 SYT6-210ENST00000641643 1587 ntBASIC18.97■□□□□ 0.63
SHFQ7M4L6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
SHFQ7M4L6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHFQ7M4L6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHFQ7M4L6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.96■□□□□ 0.63
SHFQ7M4L6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.96■□□□□ 0.63
SHFQ7M4L6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHFQ7M4L6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.96■□□□□ 0.63
SHFQ7M4L6 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.96■□□□□ 0.63
SHFQ7M4L6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.96■□□□□ 0.63
SHFQ7M4L6 AC010525.1-201ENST00000585559 441 ntBASIC18.96■□□□□ 0.63
SHFQ7M4L6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
SHFQ7M4L6 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SHFQ7M4L6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SHFQ7M4L6 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHFQ7M4L6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SHFQ7M4L6 AC003102.1-202ENST00000563394 1796 ntBASIC18.96■□□□□ 0.63
SHFQ7M4L6 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SHFQ7M4L6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHFQ7M4L6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHFQ7M4L6 AL391422.3-201ENST00000603791 2761 ntBASIC18.95■□□□□ 0.62
SHFQ7M4L6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHFQ7M4L6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHFQ7M4L6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SHFQ7M4L6 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHFQ7M4L6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.95■□□□□ 0.62
SHFQ7M4L6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHFQ7M4L6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SHFQ7M4L6 AL356441.2-201ENST00000443009 864 ntBASIC18.95■□□□□ 0.62
SHFQ7M4L6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.95■□□□□ 0.62
SHFQ7M4L6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.95■□□□□ 0.62
SHFQ7M4L6 AL034346.1-201ENST00000568244 1277 ntBASIC18.95■□□□□ 0.62
SHFQ7M4L6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.95■□□□□ 0.62
SHFQ7M4L6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.95■□□□□ 0.62
SHFQ7M4L6 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SHFQ7M4L6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHFQ7M4L6 PCDHAC2-203ENST00000615316 3011 ntBASIC18.95■□□□□ 0.62
SHFQ7M4L6 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHFQ7M4L6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHFQ7M4L6 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
SHFQ7M4L6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SHFQ7M4L6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHFQ7M4L6 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHFQ7M4L6 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SHFQ7M4L6 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHFQ7M4L6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SHFQ7M4L6 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHFQ7M4L6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SHFQ7M4L6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHFQ7M4L6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.94■□□□□ 0.62
SHFQ7M4L6 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SHFQ7M4L6 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
SHFQ7M4L6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHFQ7M4L6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHFQ7M4L6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SHFQ7M4L6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHFQ7M4L6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.94■□□□□ 0.62
SHFQ7M4L6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.94■□□□□ 0.62
SHFQ7M4L6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms