Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CX3CL1P78423 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CX3CL1P78423 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.94■□□□□ 0.3
CX3CL1P78423 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CX3CL1P78423 AP006587.3-201ENST00000525742 1516 ntBASIC16.94■□□□□ 0.3
CX3CL1P78423 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CX3CL1P78423 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.94■□□□□ 0.3
CX3CL1P78423 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.94■□□□□ 0.3
CX3CL1P78423 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CX3CL1P78423 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CX3CL1P78423 AC010542.4-201ENST00000563151 1910 ntBASIC16.94■□□□□ 0.3
CX3CL1P78423 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CX3CL1P78423 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CX3CL1P78423 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CX3CL1P78423 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CX3CL1P78423 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.93■□□□□ 0.3
CX3CL1P78423 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CX3CL1P78423 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CX3CL1P78423 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CX3CL1P78423 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
CX3CL1P78423 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CX3CL1P78423 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC16.93■□□□□ 0.3
CX3CL1P78423 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CX3CL1P78423 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CX3CL1P78423 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CX3CL1P78423 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CX3CL1P78423 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
CX3CL1P78423 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CX3CL1P78423 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CX3CL1P78423 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.92■□□□□ 0.3
CX3CL1P78423 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CX3CL1P78423 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CX3CL1P78423 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CX3CL1P78423 AC005224.4-201ENST00000583262 1652 ntBASIC16.92■□□□□ 0.3
CX3CL1P78423 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CX3CL1P78423 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.92■□□□□ 0.3
CX3CL1P78423 GUK1-205ENST00000366722 850 ntTSL 3 BASIC16.92■□□□□ 0.3
CX3CL1P78423 JTB-203ENST00000368589 1216 ntTSL 2 BASIC16.92■□□□□ 0.3
CX3CL1P78423 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
CX3CL1P78423 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CX3CL1P78423 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CX3CL1P78423 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.92■□□□□ 0.3
CX3CL1P78423 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CX3CL1P78423 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.92■□□□□ 0.3
CX3CL1P78423 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.92■□□□□ 0.3
CX3CL1P78423 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CX3CL1P78423 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CX3CL1P78423 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CX3CL1P78423 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CX3CL1P78423 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.91■□□□□ 0.3
CX3CL1P78423 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CX3CL1P78423 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CX3CL1P78423 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CX3CL1P78423 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CX3CL1P78423 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CX3CL1P78423 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CX3CL1P78423 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CX3CL1P78423 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.91■□□□□ 0.3
CX3CL1P78423 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
CX3CL1P78423 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.91■□□□□ 0.3
CX3CL1P78423 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CX3CL1P78423 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.91■□□□□ 0.3
CX3CL1P78423 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CX3CL1P78423 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CX3CL1P78423 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CX3CL1P78423 AC026310.3-201ENST00000625186 2373 ntBASIC16.91■□□□□ 0.3
CX3CL1P78423 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CX3CL1P78423 AC055733.4-201ENST00000638462 1354 ntBASIC16.9■□□□□ 0.3
CX3CL1P78423 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CX3CL1P78423 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CX3CL1P78423 AC003102.1-202ENST00000563394 1796 ntBASIC16.9■□□□□ 0.3
CX3CL1P78423 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CX3CL1P78423 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CX3CL1P78423 AC027612.3-201ENST00000413684 1047 ntBASIC16.9■□□□□ 0.3
CX3CL1P78423 LGR4-203ENST00000480977 492 ntTSL 2 BASIC16.9■□□□□ 0.3
CX3CL1P78423 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.9■□□□□ 0.3
CX3CL1P78423 AC104564.3-201ENST00000582367 638 ntBASIC16.9■□□□□ 0.3
CX3CL1P78423 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CX3CL1P78423 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CX3CL1P78423 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CX3CL1P78423 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.9■□□□□ 0.3
CX3CL1P78423 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CX3CL1P78423 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
CX3CL1P78423 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CX3CL1P78423 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.89■□□□□ 0.3
CX3CL1P78423 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.89■□□□□ 0.3
CX3CL1P78423 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CX3CL1P78423 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CX3CL1P78423 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CX3CL1P78423 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CX3CL1P78423 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CX3CL1P78423 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.89■□□□□ 0.29
CX3CL1P78423 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CX3CL1P78423 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CX3CL1P78423 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CX3CL1P78423 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CX3CL1P78423 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CX3CL1P78423 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CX3CL1P78423 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CX3CL1P78423 TPRG1LP1-201ENST00000598702 760 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms