Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.92■■□□□ 1.1
CDH6P55285 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDH6P55285 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDH6P55285 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDH6P55285 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDH6P55285 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDH6P55285 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.92■■□□□ 1.1
CDH6P55285 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CDH6P55285 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDH6P55285 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.92■■□□□ 1.1
CDH6P55285 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.92■■□□□ 1.1
CDH6P55285 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.92■■□□□ 1.1
CDH6P55285 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CDH6P55285 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.92■■□□□ 1.1
CDH6P55285 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.92■■□□□ 1.1
CDH6P55285 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.92■■□□□ 1.1
CDH6P55285 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH6P55285 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH6P55285 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH6P55285 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CDH6P55285 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH6P55285 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CDH6P55285 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.91■■□□□ 1.1
CDH6P55285 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.91■■□□□ 1.1
CDH6P55285 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.91■■□□□ 1.1
CDH6P55285 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
CDH6P55285 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH6P55285 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH6P55285 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.91■■□□□ 1.1
CDH6P55285 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH6P55285 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.91■■□□□ 1.1
CDH6P55285 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.9■■□□□ 1.1
CDH6P55285 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH6P55285 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH6P55285 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH6P55285 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.9■■□□□ 1.1
CDH6P55285 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH6P55285 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CDH6P55285 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH6P55285 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.9■■□□□ 1.1
CDH6P55285 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.9■■□□□ 1.1
CDH6P55285 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.9■■□□□ 1.1
CDH6P55285 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDH6P55285 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH6P55285 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDH6P55285 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH6P55285 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH6P55285 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CDH6P55285 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDH6P55285 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDH6P55285 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDH6P55285 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDH6P55285 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDH6P55285 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.89■■□□□ 1.09
CDH6P55285 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDH6P55285 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CDH6P55285 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDH6P55285 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.88■■□□□ 1.09
CDH6P55285 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDH6P55285 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDH6P55285 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.88■■□□□ 1.09
CDH6P55285 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CDH6P55285 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDH6P55285 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.88■■□□□ 1.09
CDH6P55285 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDH6P55285 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDH6P55285 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDH6P55285 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDH6P55285 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDH6P55285 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDH6P55285 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.87■■□□□ 1.09
CDH6P55285 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDH6P55285 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.87■■□□□ 1.09
CDH6P55285 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDH6P55285 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.87■■□□□ 1.09
CDH6P55285 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDH6P55285 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDH6P55285 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDH6P55285 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDH6P55285 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.87■■□□□ 1.09
CDH6P55285 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
CDH6P55285 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDH6P55285 ZNRF2P3-201ENST00000424200 374 ntBASIC21.87■■□□□ 1.09
CDH6P55285 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.87■■□□□ 1.09
CDH6P55285 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDH6P55285 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
CDH6P55285 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDH6P55285 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDH6P55285 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDH6P55285 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.87■■□□□ 1.09
CDH6P55285 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDH6P55285 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.87■■□□□ 1.09
CDH6P55285 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.87■■□□□ 1.09
CDH6P55285 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDH6P55285 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDH6P55285 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.86■■□□□ 1.09
CDH6P55285 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CDH6P55285 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.86■■□□□ 1.09
CDH6P55285 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDH6P55285 AC027612.3-201ENST00000413684 1047 ntBASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms