Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20■□□□□ 0.79
RPL3P39023 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RPL3P39023 AC005224.4-201ENST00000583262 1652 ntBASIC20■□□□□ 0.79
RPL3P39023 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20■□□□□ 0.79
RPL3P39023 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20■□□□□ 0.79
RPL3P39023 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPL3P39023 AC055733.4-201ENST00000638462 1354 ntBASIC19.99■□□□□ 0.79
RPL3P39023 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RPL3P39023 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPL3P39023 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.99■□□□□ 0.79
RPL3P39023 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.99■□□□□ 0.79
RPL3P39023 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.99■□□□□ 0.79
RPL3P39023 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RPL3P39023 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RPL3P39023 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPL3P39023 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RPL3P39023 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.98■□□□□ 0.79
RPL3P39023 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPL3P39023 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RPL3P39023 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPL3P39023 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPL3P39023 MIR939-201ENST00000401314 82 ntBASIC19.98■□□□□ 0.79
RPL3P39023 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.98■□□□□ 0.79
RPL3P39023 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPL3P39023 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RPL3P39023 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RPL3P39023 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RPL3P39023 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RPL3P39023 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RPL3P39023 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPL3P39023 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RPL3P39023 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.97■□□□□ 0.79
RPL3P39023 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RPL3P39023 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RPL3P39023 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RPL3P39023 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
RPL3P39023 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
RPL3P39023 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RPL3P39023 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.97■□□□□ 0.79
RPL3P39023 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RPL3P39023 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPL3P39023 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RPL3P39023 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.96■□□□□ 0.79
RPL3P39023 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPL3P39023 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RPL3P39023 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.96■□□□□ 0.79
RPL3P39023 AF213884.3-201ENST00000563833 479 ntBASIC19.96■□□□□ 0.79
RPL3P39023 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.96■□□□□ 0.79
RPL3P39023 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.96■□□□□ 0.79
RPL3P39023 AC110285.6-201ENST00000617652 491 ntBASIC19.96■□□□□ 0.79
RPL3P39023 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RPL3P39023 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.96■□□□□ 0.79
RPL3P39023 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPL3P39023 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPL3P39023 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPL3P39023 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.96■□□□□ 0.79
RPL3P39023 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RPL3P39023 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
RPL3P39023 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPL3P39023 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RPL3P39023 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.95■□□□□ 0.78
RPL3P39023 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.95■□□□□ 0.78
RPL3P39023 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.95■□□□□ 0.78
RPL3P39023 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPL3P39023 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPL3P39023 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RPL3P39023 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPL3P39023 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RPL3P39023 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.95■□□□□ 0.78
RPL3P39023 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.95■□□□□ 0.78
RPL3P39023 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPL3P39023 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPL3P39023 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.94■□□□□ 0.78
RPL3P39023 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.94■□□□□ 0.78
RPL3P39023 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPL3P39023 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPL3P39023 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RPL3P39023 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPL3P39023 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RPL3P39023 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.94■□□□□ 0.78
RPL3P39023 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPL3P39023 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.94■□□□□ 0.78
RPL3P39023 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.94■□□□□ 0.78
RPL3P39023 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.94■□□□□ 0.78
RPL3P39023 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPL3P39023 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RPL3P39023 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPL3P39023 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.94■□□□□ 0.78
RPL3P39023 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPL3P39023 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RPL3P39023 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPL3P39023 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.93■□□□□ 0.78
RPL3P39023 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RPL3P39023 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RPL3P39023 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPL3P39023 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.93■□□□□ 0.78
RPL3P39023 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.93■□□□□ 0.78
RPL3P39023 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RPL3P39023 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RPL3P39023 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms