Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPHS1O60500 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NPHS1O60500 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NPHS1O60500 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NPHS1O60500 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NPHS1O60500 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.55■□□□□ 0.88
NPHS1O60500 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
NPHS1O60500 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
NPHS1O60500 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.55■□□□□ 0.88
NPHS1O60500 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPHS1O60500 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.55■□□□□ 0.88
NPHS1O60500 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPHS1O60500 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.55■□□□□ 0.88
NPHS1O60500 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NPHS1O60500 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.55■□□□□ 0.88
NPHS1O60500 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.55■□□□□ 0.88
NPHS1O60500 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.55■□□□□ 0.88
NPHS1O60500 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NPHS1O60500 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NPHS1O60500 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
NPHS1O60500 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPHS1O60500 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPHS1O60500 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPHS1O60500 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.54■□□□□ 0.88
NPHS1O60500 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NPHS1O60500 GABARAPL3-202ENST00000624044 1851 ntBASIC20.54■□□□□ 0.88
NPHS1O60500 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPHS1O60500 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPHS1O60500 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NPHS1O60500 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
NPHS1O60500 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.54■□□□□ 0.88
NPHS1O60500 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
NPHS1O60500 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NPHS1O60500 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
NPHS1O60500 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPHS1O60500 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NPHS1O60500 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPHS1O60500 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
NPHS1O60500 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPHS1O60500 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NPHS1O60500 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.53■□□□□ 0.88
NPHS1O60500 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NPHS1O60500 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.53■□□□□ 0.88
NPHS1O60500 AL356441.2-201ENST00000443009 864 ntBASIC20.53■□□□□ 0.88
NPHS1O60500 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.53■□□□□ 0.88
NPHS1O60500 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
NPHS1O60500 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPHS1O60500 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NPHS1O60500 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
NPHS1O60500 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
NPHS1O60500 PLK5-205ENST00000642079 1969 ntBASIC20.52■□□□□ 0.88
NPHS1O60500 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NPHS1O60500 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
NPHS1O60500 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NPHS1O60500 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.52■□□□□ 0.88
NPHS1O60500 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
NPHS1O60500 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.52■□□□□ 0.88
NPHS1O60500 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.52■□□□□ 0.88
NPHS1O60500 AC133561.4-201ENST00000566112 224 ntBASIC20.52■□□□□ 0.88
NPHS1O60500 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
NPHS1O60500 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.52■□□□□ 0.88
NPHS1O60500 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.52■□□□□ 0.88
NPHS1O60500 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NPHS1O60500 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
NPHS1O60500 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
NPHS1O60500 AP005212.1-201ENST00000581547 1997 ntBASIC20.52■□□□□ 0.87
NPHS1O60500 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NPHS1O60500 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NPHS1O60500 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
NPHS1O60500 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
NPHS1O60500 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPHS1O60500 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.51■□□□□ 0.87
NPHS1O60500 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPHS1O60500 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
NPHS1O60500 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPHS1O60500 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPHS1O60500 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
NPHS1O60500 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.51■□□□□ 0.87
NPHS1O60500 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.51■□□□□ 0.87
NPHS1O60500 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
NPHS1O60500 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.51■□□□□ 0.87
NPHS1O60500 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPHS1O60500 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
NPHS1O60500 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPHS1O60500 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NPHS1O60500 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
NPHS1O60500 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPHS1O60500 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
NPHS1O60500 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPHS1O60500 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPHS1O60500 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
NPHS1O60500 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.5■□□□□ 0.87
NPHS1O60500 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPHS1O60500 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
NPHS1O60500 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPHS1O60500 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPHS1O60500 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
NPHS1O60500 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPHS1O60500 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NPHS1O60500 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms