Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TLR4O00206 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TLR4O00206 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TLR4O00206 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TLR4O00206 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TLR4O00206 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TLR4O00206 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
TLR4O00206 POU5F1P4-201ENST00000413175 1085 ntBASIC20.91■□□□□ 0.94
TLR4O00206 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.91■□□□□ 0.94
TLR4O00206 MIR4758-201ENST00000577688 71 ntBASIC20.91■□□□□ 0.94
TLR4O00206 OR10C1-204ENST00000622521 1039 ntBASIC20.91■□□□□ 0.94
TLR4O00206 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.91■□□□□ 0.94
TLR4O00206 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TLR4O00206 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.9■□□□□ 0.94
TLR4O00206 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
TLR4O00206 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TLR4O00206 AC139530.1-201ENST00000575312 1977 ntBASIC20.9■□□□□ 0.94
TLR4O00206 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.9■□□□□ 0.94
TLR4O00206 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TLR4O00206 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TLR4O00206 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.9■□□□□ 0.94
TLR4O00206 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TLR4O00206 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.9■□□□□ 0.94
TLR4O00206 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.9■□□□□ 0.94
TLR4O00206 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.9■□□□□ 0.94
TLR4O00206 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.9■□□□□ 0.94
TLR4O00206 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.9■□□□□ 0.94
TLR4O00206 AC008694.1-202ENST00000636953 945 ntBASIC20.9■□□□□ 0.94
TLR4O00206 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TLR4O00206 AC233723.2-201ENST00000623798 2106 ntBASIC20.9■□□□□ 0.94
TLR4O00206 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TLR4O00206 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.9■□□□□ 0.94
TLR4O00206 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TLR4O00206 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TLR4O00206 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.89■□□□□ 0.94
TLR4O00206 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TLR4O00206 MKRN4P-201ENST00000444706 1521 ntBASIC20.89■□□□□ 0.94
TLR4O00206 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TLR4O00206 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TLR4O00206 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.89■□□□□ 0.93
TLR4O00206 AC098934.4-201ENST00000564127 592 ntBASIC20.89■□□□□ 0.93
TLR4O00206 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.89■□□□□ 0.93
TLR4O00206 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.89■□□□□ 0.93
TLR4O00206 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.89■□□□□ 0.93
TLR4O00206 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.89■□□□□ 0.93
TLR4O00206 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TLR4O00206 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TLR4O00206 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TLR4O00206 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.89■□□□□ 0.93
TLR4O00206 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
TLR4O00206 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TLR4O00206 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TLR4O00206 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TLR4O00206 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.88■□□□□ 0.93
TLR4O00206 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TLR4O00206 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TLR4O00206 MIPEPP3-201ENST00000412105 444 ntBASIC20.88■□□□□ 0.93
TLR4O00206 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.88■□□□□ 0.93
TLR4O00206 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
TLR4O00206 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.88■□□□□ 0.93
TLR4O00206 AC069236.1-201ENST00000604339 616 ntBASIC20.88■□□□□ 0.93
TLR4O00206 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.88■□□□□ 0.93
TLR4O00206 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TLR4O00206 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
TLR4O00206 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TLR4O00206 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.87■□□□□ 0.93
TLR4O00206 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TLR4O00206 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.87■□□□□ 0.93
TLR4O00206 MIR4651-201ENST00000582622 73 ntBASIC20.87■□□□□ 0.93
TLR4O00206 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
TLR4O00206 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.87■□□□□ 0.93
TLR4O00206 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.87■□□□□ 0.93
TLR4O00206 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.87■□□□□ 0.93
TLR4O00206 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.87■□□□□ 0.93
TLR4O00206 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TLR4O00206 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TLR4O00206 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TLR4O00206 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.87■□□□□ 0.93
TLR4O00206 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TLR4O00206 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TLR4O00206 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.86■□□□□ 0.93
TLR4O00206 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TLR4O00206 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TLR4O00206 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.86■□□□□ 0.93
TLR4O00206 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TLR4O00206 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.86■□□□□ 0.93
TLR4O00206 AL512625.2-201ENST00000417533 625 ntBASIC20.86■□□□□ 0.93
TLR4O00206 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TLR4O00206 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TLR4O00206 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.86■□□□□ 0.93
TLR4O00206 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
TLR4O00206 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.86■□□□□ 0.93
TLR4O00206 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TLR4O00206 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TLR4O00206 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TLR4O00206 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TLR4O00206 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TLR4O00206 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.86■□□□□ 0.93
TLR4O00206 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TLR4O00206 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms