Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
CHKB-CPT1BH3BT56 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC11.79□□□□□ -0.52
CHKB-CPT1BH3BT56 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CHKB-CPT1BH3BT56 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CHKB-CPT1BH3BT56 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CHKB-CPT1BH3BT56 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CHKB-CPT1BH3BT56 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CHKB-CPT1BH3BT56 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CHKB-CPT1BH3BT56 EI24-212ENST00000615917 1407 ntTSL 2 BASIC11.79□□□□□ -0.52
CHKB-CPT1BH3BT56 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CHKB-CPT1BH3BT56 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CHKB-CPT1BH3BT56 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CHKB-CPT1BH3BT56 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CHKB-CPT1BH3BT56 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
CHKB-CPT1BH3BT56 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CHKB-CPT1BH3BT56 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
CHKB-CPT1BH3BT56 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CHKB-CPT1BH3BT56 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CHKB-CPT1BH3BT56 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CHKB-CPT1BH3BT56 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC11.79□□□□□ -0.52
CHKB-CPT1BH3BT56 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
CHKB-CPT1BH3BT56 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CHKB-CPT1BH3BT56 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CHKB-CPT1BH3BT56 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CHKB-CPT1BH3BT56 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CHKB-CPT1BH3BT56 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CHKB-CPT1BH3BT56 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CHKB-CPT1BH3BT56 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CHKB-CPT1BH3BT56 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 LSR-205ENST00000427250 1606 ntTSL 2 BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 LINC00273-201ENST00000539813 1452 ntBASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 ESRRAP2-201ENST00000418437 1549 ntBASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CHKB-CPT1BH3BT56 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CHKB-CPT1BH3BT56 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
CHKB-CPT1BH3BT56 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC11.77□□□□□ -0.52
CHKB-CPT1BH3BT56 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC11.77□□□□□ -0.52
CHKB-CPT1BH3BT56 C11orf96-202ENST00000528572 1834 ntBASIC11.77□□□□□ -0.52
CHKB-CPT1BH3BT56 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
CHKB-CPT1BH3BT56 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CHKB-CPT1BH3BT56 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CHKB-CPT1BH3BT56 DENR-202ENST00000455982 1052 ntTSL 5 BASIC11.77□□□□□ -0.53
CHKB-CPT1BH3BT56 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CHKB-CPT1BH3BT56 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC11.77□□□□□ -0.53
CHKB-CPT1BH3BT56 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CHKB-CPT1BH3BT56 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC11.77□□□□□ -0.53
CHKB-CPT1BH3BT56 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CHKB-CPT1BH3BT56 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CHKB-CPT1BH3BT56 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CHKB-CPT1BH3BT56 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CHKB-CPT1BH3BT56 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CHKB-CPT1BH3BT56 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CHKB-CPT1BH3BT56 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CHKB-CPT1BH3BT56 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CHKB-CPT1BH3BT56 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC11.77□□□□□ -0.53
CHKB-CPT1BH3BT56 AC092068.2-201ENST00000590491 1708 ntBASIC11.77□□□□□ -0.53
CHKB-CPT1BH3BT56 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CHKB-CPT1BH3BT56 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
CHKB-CPT1BH3BT56 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CHKB-CPT1BH3BT56 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC11.77□□□□□ -0.53
CHKB-CPT1BH3BT56 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CHKB-CPT1BH3BT56 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC11.77□□□□□ -0.53
CHKB-CPT1BH3BT56 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
CHKB-CPT1BH3BT56 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
CHKB-CPT1BH3BT56 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CHKB-CPT1BH3BT56 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CHKB-CPT1BH3BT56 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
CHKB-CPT1BH3BT56 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms