Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
RBFOX3A6NFN3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RBFOX3A6NFN3 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC16.65■□□□□ 0.26
RBFOX3A6NFN3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RBFOX3A6NFN3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.65■□□□□ 0.26
RBFOX3A6NFN3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RBFOX3A6NFN3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RBFOX3A6NFN3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.65■□□□□ 0.26
RBFOX3A6NFN3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RBFOX3A6NFN3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.65■□□□□ 0.26
RBFOX3A6NFN3 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RBFOX3A6NFN3 AC022413.1-201ENST00000624602 984 ntBASIC16.65■□□□□ 0.26
RBFOX3A6NFN3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RBFOX3A6NFN3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RBFOX3A6NFN3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RBFOX3A6NFN3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RBFOX3A6NFN3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RBFOX3A6NFN3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RBFOX3A6NFN3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RBFOX3A6NFN3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RBFOX3A6NFN3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.65■□□□□ 0.26
RBFOX3A6NFN3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RBFOX3A6NFN3 AC098818.2-201ENST00000564925 2320 ntBASIC16.64■□□□□ 0.25
RBFOX3A6NFN3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.64■□□□□ 0.25
RBFOX3A6NFN3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
RBFOX3A6NFN3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RBFOX3A6NFN3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RBFOX3A6NFN3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RBFOX3A6NFN3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RBFOX3A6NFN3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC16.64■□□□□ 0.25
RBFOX3A6NFN3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RBFOX3A6NFN3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RBFOX3A6NFN3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.64■□□□□ 0.25
RBFOX3A6NFN3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.64■□□□□ 0.25
RBFOX3A6NFN3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RBFOX3A6NFN3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RBFOX3A6NFN3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RBFOX3A6NFN3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.64■□□□□ 0.25
RBFOX3A6NFN3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RBFOX3A6NFN3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.63■□□□□ 0.25
RBFOX3A6NFN3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RBFOX3A6NFN3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RBFOX3A6NFN3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RBFOX3A6NFN3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RBFOX3A6NFN3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.63■□□□□ 0.25
RBFOX3A6NFN3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RBFOX3A6NFN3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RBFOX3A6NFN3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RBFOX3A6NFN3 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
RBFOX3A6NFN3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RBFOX3A6NFN3 AC004448.1-201ENST00000458332 883 ntBASIC16.63■□□□□ 0.25
RBFOX3A6NFN3 GAK-223ENST00000628912 497 ntTSL 5 BASIC16.63■□□□□ 0.25
RBFOX3A6NFN3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RBFOX3A6NFN3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RBFOX3A6NFN3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.63■□□□□ 0.25
RBFOX3A6NFN3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RBFOX3A6NFN3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RBFOX3A6NFN3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RBFOX3A6NFN3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RBFOX3A6NFN3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RBFOX3A6NFN3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC16.62■□□□□ 0.25
RBFOX3A6NFN3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RBFOX3A6NFN3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RBFOX3A6NFN3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC16.62■□□□□ 0.25
RBFOX3A6NFN3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RBFOX3A6NFN3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RBFOX3A6NFN3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RBFOX3A6NFN3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RBFOX3A6NFN3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RBFOX3A6NFN3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RBFOX3A6NFN3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RBFOX3A6NFN3 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RBFOX3A6NFN3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RBFOX3A6NFN3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RBFOX3A6NFN3 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC16.62■□□□□ 0.25
RBFOX3A6NFN3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RBFOX3A6NFN3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RBFOX3A6NFN3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RBFOX3A6NFN3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RBFOX3A6NFN3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RBFOX3A6NFN3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RBFOX3A6NFN3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
RBFOX3A6NFN3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RBFOX3A6NFN3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RBFOX3A6NFN3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RBFOX3A6NFN3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC16.61■□□□□ 0.25
RBFOX3A6NFN3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RBFOX3A6NFN3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RBFOX3A6NFN3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RBFOX3A6NFN3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RBFOX3A6NFN3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RBFOX3A6NFN3 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RBFOX3A6NFN3 AC018755.3-202ENST00000596210 929 ntBASIC16.61■□□□□ 0.25
RBFOX3A6NFN3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RBFOX3A6NFN3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RBFOX3A6NFN3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RBFOX3A6NFN3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RBFOX3A6NFN3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RBFOX3A6NFN3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RBFOX3A6NFN3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms