Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV9-1A0A075B6T8 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV9-1A0A075B6T8 PCDHAC2-203ENST00000615316 3011 ntBASIC15.86■□□□□ 0.13
TRAV9-1A0A075B6T8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAV9-1A0A075B6T8 TNXA-203ENST00000507684 2038 ntBASIC15.86■□□□□ 0.13
TRAV9-1A0A075B6T8 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC15.86■□□□□ 0.13
TRAV9-1A0A075B6T8 HES4-204ENST00000484667 667 ntTSL 3 BASIC15.86■□□□□ 0.13
TRAV9-1A0A075B6T8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV9-1A0A075B6T8 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV9-1A0A075B6T8 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV9-1A0A075B6T8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV9-1A0A075B6T8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV9-1A0A075B6T8 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV9-1A0A075B6T8 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV9-1A0A075B6T8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV9-1A0A075B6T8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV9-1A0A075B6T8 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV9-1A0A075B6T8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TRAV9-1A0A075B6T8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV9-1A0A075B6T8 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAV9-1A0A075B6T8 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV9-1A0A075B6T8 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAV9-1A0A075B6T8 AC087393.1-201ENST00000582896 145 ntBASIC15.85■□□□□ 0.13
TRAV9-1A0A075B6T8 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV9-1A0A075B6T8 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAV9-1A0A075B6T8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV9-1A0A075B6T8 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV9-1A0A075B6T8 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV9-1A0A075B6T8 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV9-1A0A075B6T8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV9-1A0A075B6T8 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV9-1A0A075B6T8 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV9-1A0A075B6T8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAV9-1A0A075B6T8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV9-1A0A075B6T8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV9-1A0A075B6T8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV9-1A0A075B6T8 AC027702.1-201ENST00000563810 1770 ntBASIC15.85■□□□□ 0.13
TRAV9-1A0A075B6T8 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TRAV9-1A0A075B6T8 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
TRAV9-1A0A075B6T8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV9-1A0A075B6T8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV9-1A0A075B6T8 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC15.84■□□□□ 0.13
TRAV9-1A0A075B6T8 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV9-1A0A075B6T8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRAV9-1A0A075B6T8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRAV9-1A0A075B6T8 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV9-1A0A075B6T8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC15.84■□□□□ 0.13
TRAV9-1A0A075B6T8 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV9-1A0A075B6T8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV9-1A0A075B6T8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV9-1A0A075B6T8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TRAV9-1A0A075B6T8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRAV9-1A0A075B6T8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV9-1A0A075B6T8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV9-1A0A075B6T8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV9-1A0A075B6T8 AC026471.6-201ENST00000622954 1905 ntBASIC15.84■□□□□ 0.13
TRAV9-1A0A075B6T8 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV9-1A0A075B6T8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TRAV9-1A0A075B6T8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV9-1A0A075B6T8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV9-1A0A075B6T8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV9-1A0A075B6T8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
TRAV9-1A0A075B6T8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV9-1A0A075B6T8 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV9-1A0A075B6T8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV9-1A0A075B6T8 AL162377.1-201ENST00000618844 1793 ntBASIC15.83■□□□□ 0.12
TRAV9-1A0A075B6T8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TRAV9-1A0A075B6T8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV9-1A0A075B6T8 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TRAV9-1A0A075B6T8 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV9-1A0A075B6T8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV9-1A0A075B6T8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAV9-1A0A075B6T8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
TRAV9-1A0A075B6T8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV9-1A0A075B6T8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV9-1A0A075B6T8 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TRAV9-1A0A075B6T8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV9-1A0A075B6T8 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV9-1A0A075B6T8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV9-1A0A075B6T8 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV9-1A0A075B6T8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV9-1A0A075B6T8 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV9-1A0A075B6T8 LETM1P2-201ENST00000597330 2178 ntBASIC15.82■□□□□ 0.12
TRAV9-1A0A075B6T8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV9-1A0A075B6T8 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV9-1A0A075B6T8 DUX4L4-201ENST00000566884 1269 ntBASIC15.82■□□□□ 0.12
TRAV9-1A0A075B6T8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRAV9-1A0A075B6T8 AC018755.3-202ENST00000596210 929 ntBASIC15.82■□□□□ 0.12
TRAV9-1A0A075B6T8 CR559946.2-201ENST00000623684 991 ntBASIC15.82■□□□□ 0.12
TRAV9-1A0A075B6T8 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV9-1A0A075B6T8 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV9-1A0A075B6T8 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV9-1A0A075B6T8 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV9-1A0A075B6T8 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRAV9-1A0A075B6T8 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
TRAV9-1A0A075B6T8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV9-1A0A075B6T8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV9-1A0A075B6T8 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV9-1A0A075B6T8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV9-1A0A075B6T8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms