Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UBQLN3Q9H347 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBQLN3Q9H347 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
UBQLN3Q9H347 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.57■□□□□ 0.72
UBQLN3Q9H347 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBQLN3Q9H347 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBQLN3Q9H347 AC005224.4-201ENST00000583262 1652 ntBASIC19.57■□□□□ 0.72
UBQLN3Q9H347 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.57■□□□□ 0.72
UBQLN3Q9H347 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.57■□□□□ 0.72
UBQLN3Q9H347 NTF6G-201ENST00000591094 616 ntBASIC19.57■□□□□ 0.72
UBQLN3Q9H347 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
UBQLN3Q9H347 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.57■□□□□ 0.72
UBQLN3Q9H347 OR7E47P-201ENST00000546390 1422 ntBASIC19.57■□□□□ 0.72
UBQLN3Q9H347 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBQLN3Q9H347 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.57■□□□□ 0.72
UBQLN3Q9H347 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UBQLN3Q9H347 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN3Q9H347 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN3Q9H347 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN3Q9H347 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
UBQLN3Q9H347 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN3Q9H347 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.56■□□□□ 0.72
UBQLN3Q9H347 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
UBQLN3Q9H347 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN3Q9H347 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.56■□□□□ 0.72
UBQLN3Q9H347 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN3Q9H347 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.56■□□□□ 0.72
UBQLN3Q9H347 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.56■□□□□ 0.72
UBQLN3Q9H347 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN3Q9H347 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
UBQLN3Q9H347 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN3Q9H347 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN3Q9H347 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.56■□□□□ 0.72
UBQLN3Q9H347 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.56■□□□□ 0.72
UBQLN3Q9H347 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.56■□□□□ 0.72
UBQLN3Q9H347 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN3Q9H347 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.56■□□□□ 0.72
UBQLN3Q9H347 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.56■□□□□ 0.72
UBQLN3Q9H347 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN3Q9H347 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN3Q9H347 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBQLN3Q9H347 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBQLN3Q9H347 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.55■□□□□ 0.72
UBQLN3Q9H347 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UBQLN3Q9H347 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
UBQLN3Q9H347 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UBQLN3Q9H347 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.55■□□□□ 0.72
UBQLN3Q9H347 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.55■□□□□ 0.72
UBQLN3Q9H347 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UBQLN3Q9H347 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.55■□□□□ 0.72
UBQLN3Q9H347 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UBQLN3Q9H347 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBQLN3Q9H347 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBQLN3Q9H347 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UBQLN3Q9H347 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBQLN3Q9H347 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBQLN3Q9H347 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
UBQLN3Q9H347 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBQLN3Q9H347 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UBQLN3Q9H347 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBQLN3Q9H347 AL024507.2-201ENST00000606070 2574 ntBASIC19.54■□□□□ 0.72
UBQLN3Q9H347 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBQLN3Q9H347 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
UBQLN3Q9H347 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.54■□□□□ 0.72
UBQLN3Q9H347 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UBQLN3Q9H347 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.54■□□□□ 0.72
UBQLN3Q9H347 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBQLN3Q9H347 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBQLN3Q9H347 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBQLN3Q9H347 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
UBQLN3Q9H347 KRT18P61-201ENST00000585825 1298 ntBASIC19.54■□□□□ 0.72
UBQLN3Q9H347 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.54■□□□□ 0.72
UBQLN3Q9H347 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UBQLN3Q9H347 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
UBQLN3Q9H347 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
UBQLN3Q9H347 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.54■□□□□ 0.72
UBQLN3Q9H347 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
UBQLN3Q9H347 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBQLN3Q9H347 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UBQLN3Q9H347 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBQLN3Q9H347 AC005229.4-201ENST00000610085 2198 ntBASIC19.53■□□□□ 0.72
UBQLN3Q9H347 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBQLN3Q9H347 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.53■□□□□ 0.72
UBQLN3Q9H347 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBQLN3Q9H347 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.53■□□□□ 0.72
UBQLN3Q9H347 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
UBQLN3Q9H347 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.53■□□□□ 0.72
UBQLN3Q9H347 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
UBQLN3Q9H347 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.53■□□□□ 0.72
UBQLN3Q9H347 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.53■□□□□ 0.72
UBQLN3Q9H347 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.53■□□□□ 0.72
UBQLN3Q9H347 AC022517.1-201ENST00000592429 346 ntBASIC19.53■□□□□ 0.72
UBQLN3Q9H347 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBQLN3Q9H347 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.53■□□□□ 0.72
UBQLN3Q9H347 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.53■□□□□ 0.72
UBQLN3Q9H347 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
UBQLN3Q9H347 AP004607.7-201ENST00000527152 1677 ntBASIC19.52■□□□□ 0.72
UBQLN3Q9H347 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBQLN3Q9H347 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.52■□□□□ 0.72
UBQLN3Q9H347 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms