Protein–RNA interactions for Protein: Q99643

SDHC, Succinate dehydrogenase cytochrome b560 subunit, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHCQ99643 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SDHCQ99643 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
SDHCQ99643 AL512408.1-201ENST00000569378 2000 ntBASIC18.32■□□□□ 0.52
SDHCQ99643 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SDHCQ99643 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SDHCQ99643 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SDHCQ99643 LETM1P2-201ENST00000597330 2178 ntBASIC18.31■□□□□ 0.52
SDHCQ99643 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
SDHCQ99643 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SDHCQ99643 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SDHCQ99643 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.31■□□□□ 0.52
SDHCQ99643 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.31■□□□□ 0.52
SDHCQ99643 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SDHCQ99643 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
SDHCQ99643 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.31■□□□□ 0.52
SDHCQ99643 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.31■□□□□ 0.52
SDHCQ99643 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.31■□□□□ 0.52
SDHCQ99643 AC004408.2-201ENST00000623613 2777 ntBASIC18.31■□□□□ 0.52
SDHCQ99643 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.31■□□□□ 0.52
SDHCQ99643 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SDHCQ99643 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SDHCQ99643 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.31■□□□□ 0.52
SDHCQ99643 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SDHCQ99643 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SDHCQ99643 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SDHCQ99643 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SDHCQ99643 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SDHCQ99643 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SDHCQ99643 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SDHCQ99643 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SDHCQ99643 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.3■□□□□ 0.52
SDHCQ99643 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SDHCQ99643 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SDHCQ99643 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.3■□□□□ 0.52
SDHCQ99643 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.3■□□□□ 0.52
SDHCQ99643 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SDHCQ99643 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.3■□□□□ 0.52
SDHCQ99643 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.3■□□□□ 0.52
SDHCQ99643 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
SDHCQ99643 AC099778.1-201ENST00000568593 1911 ntBASIC18.3■□□□□ 0.52
SDHCQ99643 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SDHCQ99643 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SDHCQ99643 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SDHCQ99643 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SDHCQ99643 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SDHCQ99643 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SDHCQ99643 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.3■□□□□ 0.52
SDHCQ99643 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SDHCQ99643 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SDHCQ99643 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SDHCQ99643 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
SDHCQ99643 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.3■□□□□ 0.52
SDHCQ99643 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SDHCQ99643 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SDHCQ99643 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SDHCQ99643 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SDHCQ99643 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SDHCQ99643 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
SDHCQ99643 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SDHCQ99643 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SDHCQ99643 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SDHCQ99643 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
SDHCQ99643 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SDHCQ99643 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SDHCQ99643 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.29■□□□□ 0.52
SDHCQ99643 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.29■□□□□ 0.52
SDHCQ99643 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.29■□□□□ 0.52
SDHCQ99643 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SDHCQ99643 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SDHCQ99643 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SDHCQ99643 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SDHCQ99643 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SDHCQ99643 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SDHCQ99643 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SDHCQ99643 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.28■□□□□ 0.52
SDHCQ99643 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
SDHCQ99643 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.28■□□□□ 0.52
SDHCQ99643 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SDHCQ99643 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.28■□□□□ 0.52
SDHCQ99643 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SDHCQ99643 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SDHCQ99643 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SDHCQ99643 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.28■□□□□ 0.52
SDHCQ99643 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.28■□□□□ 0.52
SDHCQ99643 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SDHCQ99643 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SDHCQ99643 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SDHCQ99643 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.28■□□□□ 0.52
SDHCQ99643 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.28■□□□□ 0.52
SDHCQ99643 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SDHCQ99643 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.27■□□□□ 0.52
SDHCQ99643 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.27■□□□□ 0.52
SDHCQ99643 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SDHCQ99643 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SDHCQ99643 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
SDHCQ99643 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SDHCQ99643 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SDHCQ99643 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SDHCQ99643 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.27■□□□□ 0.52
SDHCQ99643 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms